RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 CCDC187A0A096LP49 1063 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 HTRA2O43464 458 aaPredicted RBP23.84■■□□□ 1.41
LSM7-205ENST00000589532 ELFN1P0C7U0 828 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 CTSEP14091 401 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 LBRQ14739 615 aaKnown RBP23.84■■□□□ 1.41
LSM7-205ENST00000589532 GKN2Q86XP6 184 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 LZTR1Q8N653 840 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 SCG3Q8WXD2 468 aaKnown RBP23.84■■□□□ 1.41
LSM7-205ENST00000589532 NUP85Q9BW27 656 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 CTTNBP2NLQ9P2B4 639 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 GULP1Q9UBP9 304 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 B4GALT6Q9UBX8 382 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 IP6K2Q9UHH9 426 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 GPR34Q9UPC5 381 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 PIEZO2Q9H5I5 2752 aa23.84■■□□□ 1.41
LSM7-205ENST00000589532 ERVH48-1M5A8F1 160 aa23.83■■□□□ 1.41
LSM7-205ENST00000589532 KLK10O43240 276 aa23.83■■□□□ 1.41
LSM7-205ENST00000589532 RBMS1P29558 406 aaKnown RBP23.83■■□□□ 1.41
LSM7-205ENST00000589532 MAGEA1P43355 309 aa23.83■■□□□ 1.41
LSM7-205ENST00000589532 PIGHQ14442 188 aaPredicted RBP23.83■■□□□ 1.41
LSM7-205ENST00000589532 RD3Q7Z3Z2 195 aa23.83■■□□□ 1.41
LSM7-205ENST00000589532 POLNQ7Z5Q5 900 aa23.83■■□□□ 1.41
LSM7-205ENST00000589532 RHOT2Q8IXI1 618 aa23.83■■□□□ 1.41
LSM7-205ENST00000589532 PGBD5Q8N414 524 aa23.83■■□□□ 1.41
LSM7-205ENST00000589532 OR56A4Q8NGH8 313 aa23.83■■□□□ 1.41
LSM7-205ENST00000589532 COQ10AQ96MF6 247 aa23.83■■□□□ 1.41
LSM7-205ENST00000589532 LGR4Q9BXB1 951 aa23.83■■□□□ 1.41
LSM7-205ENST00000589532 MRPL40Q9NQ50 206 aaKnown RBP23.83■■□□□ 1.41
LSM7-205ENST00000589532 DOLKQ9UPQ8 538 aa23.83■■□□□ 1.41
LSM7-205ENST00000589532 TTC24A2A3L6 582 aaPredicted RBP23.82■■□□□ 1.4
LSM7-205ENST00000589532 MYO1FO00160 1098 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 NOBOXO60393 691 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 SOCS5O75159 536 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 ITGA2BP08514 1039 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 SCNN1BP51168 640 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 CNGA3Q16281 694 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 SMTNL2Q2TAL5 461 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 CERCAMQ5T4B2 595 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 BROXQ5VW32 411 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 TXNRD3NBQ6F5E7 133 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 OGFOD3Q6PK18 319 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 SFTPA2Q8IWL1 248 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 CCDC112Q8NEF3 446 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 CSPG4P5Q96PW8 444 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 MGME1Q9BQP7 344 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 ZWILCHQ9H900 591 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 ANAPC7Q9UJX3 599 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 EPN1Q9Y6I3 576 aaPredicted RBP23.82■■□□□ 1.4
LSM7-205ENST00000589532 COL6A6A6NMZ7 2263 aa23.82■■□□□ 1.4
LSM7-205ENST00000589532 ARHGEF17Q96PE2 2063 aaPredicted RBP23.81■■□□□ 1.4
LSM7-205ENST00000589532 H3BRJ5 948 aa23.81■■□□□ 1.4
LSM7-205ENST00000589532 CACNB4O00305 520 aaPredicted RBP23.81■■□□□ 1.4
LSM7-205ENST00000589532 TNFRSF10CO14798 259 aa23.81■■□□□ 1.4
LSM7-205ENST00000589532 MAFKO60675 156 aa23.81■■□□□ 1.4
LSM7-205ENST00000589532 LCA5LO95447 670 aa23.81■■□□□ 1.4
LSM7-205ENST00000589532 TNFP01375 233 aa23.81■■□□□ 1.4
LSM7-205ENST00000589532 RENBPP51606 427 aa23.81■■□□□ 1.4
LSM7-205ENST00000589532 POLR2LP62875 67 aaKnown RBP23.81■■□□□ 1.4
LSM7-205ENST00000589532 CCL7P80098 99 aa23.81■■□□□ 1.4
LSM7-205ENST00000589532 CBARPQ8N350 705 aaPredicted RBP23.81■■□□□ 1.4
LSM7-205ENST00000589532 OR6C4Q8NGE1 309 aa23.81■■□□□ 1.4
LSM7-205ENST00000589532 ZNF564Q8TBZ8 553 aaPredicted RBP23.81■■□□□ 1.4
LSM7-205ENST00000589532 WDR26Q9H7D7 661 aa23.81■■□□□ 1.4
LSM7-205ENST00000589532 SYNDIG1Q9H7V2 258 aa23.81■■□□□ 1.4
LSM7-205ENST00000589532 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.81■■□□□ 1.4
LSM7-205ENST00000589532 APPL1Q9UKG1 709 aa23.81■■□□□ 1.4
LSM7-205ENST00000589532 BOD1L1Q8NFC6 3051 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.8■■□□□ 1.4
LSM7-205ENST00000589532 FLNBO75369 2602 aaKnown RBP23.8■■□□□ 1.4
LSM7-205ENST00000589532 NDUFA10O95299 355 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 RPLP0P05388 317 aaKnown RBP23.8■■□□□ 1.4
LSM7-205ENST00000589532 LHCGRP22888 699 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 CCKBRP32239 447 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 HSPA9P38646 679 aaKnown RBP23.8■■□□□ 1.4
LSM7-205ENST00000589532 SLC25A11Q02978 314 aaKnown RBP23.8■■□□□ 1.4
LSM7-205ENST00000589532 C19orf57Q0VDD7 668 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 TRAF2Q12933 501 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 CLN3Q13286 438 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 PNCKQ6P2M8 343 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 ZNF843Q8N446 348 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 ARL14Q8N4G2 192 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 NIPA2Q8N8Q9 360 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 GFM1Q96RP9 751 aaKnown RBP23.8■■□□□ 1.4
LSM7-205ENST00000589532 NUDCD1Q96RS6 583 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 TMEM168Q9H0V1 697 aa23.8■■□□□ 1.4
LSM7-205ENST00000589532 HEXIM1O94992 359 aaKnown RBP23.79■■□□□ 1.4
LSM7-205ENST00000589532 TNFSF15O95150 251 aa23.79■■□□□ 1.4
LSM7-205ENST00000589532 RARAP10276 462 aa23.79■■□□□ 1.4
LSM7-205ENST00000589532 AMPD1P23109 780 aa23.79■■□□□ 1.4
LSM7-205ENST00000589532 KELP23276 732 aa23.79■■□□□ 1.4
LSM7-205ENST00000589532 RHDQ02161 417 aa23.79■■□□□ 1.4
LSM7-205ENST00000589532 EIF3IQ13347 325 aaKnown RBP23.79■■□□□ 1.4
LSM7-205ENST00000589532 HLTFQ14527 1009 aaKnown RBP eCLIP23.79■■□□□ 1.4
LSM7-205ENST00000589532 ZNF235Q14590 738 aa23.79■■□□□ 1.4
LSM7-205ENST00000589532 ARHGAP40Q5TG30 622 aa23.79■■□□□ 1.4
LSM7-205ENST00000589532 TMCO3Q6UWJ1 677 aa23.79■■□□□ 1.4
LSM7-205ENST00000589532 CCL4L1Q8NHW4 92 aa23.79■■□□□ 1.4
LSM7-205ENST00000589532 TEKT4Q8WW24 435 aa23.79■■□□□ 1.4
LSM7-205ENST00000589532 TTC9Q92623 222 aa23.79■■□□□ 1.4
LSM7-205ENST00000589532 MCCC1Q96RQ3 725 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms