RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 KITP10721 976 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 AOC1P19801 751 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 COL9A1P20849 921 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 GLDCP23378 1020 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 TARSP26639 723 aaKnown RBP10.4□□□□□ -0.74
VPS25-203ENST00000589520 MZF1P28698 734 aaPredicted RBP10.4□□□□□ -0.74
VPS25-203ENST00000589520 PRDX6P30041 224 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 SLC8A1P32418 973 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 AVPR1AP37288 418 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 CSKP41240 450 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 ARSDP51689 593 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 EPHB1P54762 984 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 ATP6V0D1P61421 351 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 SNRPD1P62314 119 aaKnown RBP10.4□□□□□ -0.74
VPS25-203ENST00000589520 PFKPQ01813 784 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 BCL2L1Q07817 233 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 ZRSR2Q15696 482 aaKnown RBP10.4□□□□□ -0.74
VPS25-203ENST00000589520 DNAL1Q4LDG9 190 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 LYPLAL1Q5VWZ2 237 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 FBXW10Q5XX13 1052 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 UGT3A1Q6NUS8 523 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 EPGNQ6UW88 154 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 TMPRSS6Q8IU80 811 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 MFSD6LQ8IWD5 586 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 PLPP6Q8IY26 295 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 ACVR1CQ8NER5 493 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 LPCAT1Q8NF37 534 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 HEXDCQ8WVB3 486 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 WBP2Q969T9 261 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 SLC7A6OSQ96CW6 309 aaPredicted RBP10.4□□□□□ -0.74
VPS25-203ENST00000589520 PTCD3Q96EY7 689 aaKnown RBP10.4□□□□□ -0.74
VPS25-203ENST00000589520 DNAJC1Q96KC8 554 aaKnown RBP10.4□□□□□ -0.74
VPS25-203ENST00000589520 TUBGCP5Q96RT8 1024 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 SLC22A12Q96S37 553 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 CORO1BQ9BR76 489 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 AARSD1Q9BTE6 412 aaKnown RBP10.4□□□□□ -0.74
VPS25-203ENST00000589520 CEP44Q9C0F1 390 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 TLR9Q9NR96 1032 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 TAS2R13Q9NYV9 303 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 CPSF2Q9P2I0 782 aaKnown RBP10.4□□□□□ -0.74
VPS25-203ENST00000589520 LHX3Q9UBR4 397 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 TAGLN3Q9UI15 199 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 PKP3Q9Y446 797 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 ARL5AQ9Y689 179 aa10.4□□□□□ -0.74
VPS25-203ENST00000589520 A0A1W2PRU2 124 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 MATN2O00339 956 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SOX1O00570 391 aaPredicted RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 ZNF195O14628 629 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SLC9A3R1O14745 358 aaPredicted RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 GYG2O15488 501 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 HTRA2O43464 458 aaPredicted RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 DLX3O60479 287 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SNAP91O60641 907 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SMIM24O75264 130 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 LYPLA1O75608 230 aaPredicted RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 IPO13O94829 963 aaKnown RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 PGLSO95336 258 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 LMNAP02545 664 aaKnown RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 SBK3P0C264 359 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SPATA31D3P0C874 917 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 CCDC166P0CW27 439 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 TPBGLP0DKB5 382 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 EZRP15311 586 aaKnown RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 TFEBP19484 476 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 EN2P19622 333 aaPredicted RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 CCND1P24385 295 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 NFKBIAP25963 317 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 WEE1P30291 646 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 CTNNB1P35222 781 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 HMGCLP35914 325 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 PTGER3P43115 390 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 ABCG1P45844 678 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 RGRP47804 291 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 IDH3AP50213 366 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 KCNJ2P63252 427 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 CYP4F8P98187 520 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 NFKB2Q00653 900 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 RAD51Q06609 339 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 CSHL1Q14406 222 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SMAD1Q15797 465 aaKnown RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 PLEKHG6Q3KR16 790 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 HSF5Q4G112 596 aaPredicted RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 TECRLQ5HYJ1 363 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SH2D4BQ5SQS7 431 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 WASHC2DQ5SRD0 308 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 ZDHHC20Q5W0Z9 365 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 CES4AQ5XG92 561 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SEL1L3Q68CR1 1132 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SPATA31D4Q6ZUB0 917 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 ACAD11Q709F0 780 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 RAB44Q7Z6P3 723 aaPredicted RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 UBE2Q1Q7Z7E8 422 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 PACS2Q86VP3 889 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 HS6ST3Q8IZP7 471 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 CMTM8Q8IZV2 173 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 CBARPQ8N350 705 aaPredicted RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 NKAPQ8N5F7 415 aaKnown RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 EFHBQ8N7U6 833 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 MDGA1Q8NFP4 955 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms