RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 AARSD1Q9BTE6 412 aaKnown RBP15.28■□□□□ 0.04
MBD1-217ENST00000588937 MCOLN1Q9GZU1 580 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 CCDC68Q9H2F9 335 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 WDR55Q9H6Y2 383 aaPredicted RBP15.28■□□□□ 0.04
MBD1-217ENST00000588937 SYTL2Q9HCH5 934 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 MRPL17Q9NRX2 175 aaKnown RBP15.28■□□□□ 0.04
MBD1-217ENST00000588937 GTSE1Q9NYZ3 720 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 STX18Q9P2W9 335 aaKnown RBP15.28■□□□□ 0.04
MBD1-217ENST00000588937 SSX2IPQ9Y2D8 614 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 ACTL7AQ9Y615 435 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 PLXNA4Q9HCM2 1894 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 MEI4A8MW99 385 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 BUD23O43709 281 aaKnown RBP15.27■□□□□ 0.04
MBD1-217ENST00000588937 TBL1XO60907 577 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 SLC4A1P02730 911 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 F11P03951 625 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 PIRTP0C851 137 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 IMPDH1P20839 514 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 LPOP22079 712 aaPredicted RBP15.27■□□□□ 0.04
MBD1-217ENST00000588937 EPHA3P29320 983 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 PPM1AP35813 382 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 CCR10P46092 362 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 ACTR3P61158 418 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 ARF5P84085 180 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 SLC25A3Q00325 362 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 NFKB2Q00653 900 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 SLC34A1Q06495 639 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 PDAP1Q13442 181 aaKnown RBP15.27■□□□□ 0.04
MBD1-217ENST00000588937 C1orf146Q5VVC0 180 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 NXNQ6DKJ4 435 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 ISCA2Q86U28 154 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 CARNMT1Q8N4J0 409 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 RP9Q8TA86 221 aaKnown RBP15.27■□□□□ 0.04
MBD1-217ENST00000588937 ACTRT2Q8TDY3 377 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 USP13Q92995 863 aaPredicted RBP15.27■□□□□ 0.04
MBD1-217ENST00000588937 EXOC2Q96KP1 924 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 ASB2Q96Q27 587 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 ALG9Q9H6U8 611 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 RC3H2Q9HBD1 1191 aaKnown RBP15.27■□□□□ 0.04
MBD1-217ENST00000588937 HACD3Q9P035 362 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 SLC7A8Q9UHI5 535 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 ASB3Q9Y575 518 aa15.27■□□□□ 0.04
MBD1-217ENST00000588937 ANKRD36A6QL64 1941 aa15.27■□□□□ 0.03
MBD1-217ENST00000588937 A0A088AWK7 358 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 CCNT2O60583 730 aaKnown RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 NDUFS3O75489 264 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 KRT36O76013 467 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 TMCC1O94876 653 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 LUC7L3O95232 432 aaKnown RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 CD1DP15813 335 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 PIK3R1P27986 724 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 PTDSS1P48651 473 aaKnown RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 CUL3Q13618 768 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 PTPRCAPQ14761 206 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 HERC3Q15034 1050 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 PDCD2Q16342 344 aaPredicted RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 ZNF549Q6P9A3 640 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 NCEH1Q6PIU2 408 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 TMEM207Q6UWW9 146 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 RIPOR1Q6ZS17 1223 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 FRMD7Q6ZUT3 714 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 RAB44Q7Z6P3 723 aaPredicted RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 LPCAT1Q8NF37 534 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 OR4K2Q8NGD2 314 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 CEP70Q8NHQ1 597 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 GIMAP7Q8NHV1 300 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 RHEBL1Q8TAI7 183 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 L3HYPDHQ96EM0 354 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 TMA16Q96EY4 203 aaKnown RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 MAELQ96JY0 434 aaKnown RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 SHCBP1LQ9BZQ2 653 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 CYP4F12Q9HCS2 524 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 ACSS2Q9NR19 701 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 SMPD4Q9NXE4 827 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 LSM7Q9UK45 103 aaKnown RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 ANGPTL2Q9UKU9 493 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 SPO11Q9Y5K1 396 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 LOC100653049A0A140TA62 436 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 NEMP2A6NFY4 417 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 ANKRD66B4E2M5 251 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 FKBP6O75344 327 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 KRT34O76011 436 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 OLFM2O95897 454 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 PRLP01236 227 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 ZNF37AP17032 561 aaPredicted RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 VHLP40337 213 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 AP2B1P63010 937 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 SEMA3AQ14563 771 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 TMEM150AQ86TG1 271 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 CUZD1Q86UP6 607 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 KCNV2Q8TDN2 545 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 WBP2Q969T9 261 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 ZFRQ96KR1 1074 aaKnown RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 LENG8Q96PV6 779 aaPredicted RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 PANX3Q96QZ0 392 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 TFB2MQ9H5Q4 396 aaKnown RBP15.26■□□□□ 0.03
MBD1-217ENST00000588937 ZNF385DQ9H6B1 395 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 NDE1Q9NXR1 346 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 TAS2R13Q9NYV9 303 aa15.26■□□□□ 0.03
MBD1-217ENST00000588937 VPS28Q9UK41 221 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms