RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 PTPRCAPQ14761 206 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 TNFAIP8L3Q5GJ75 292 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 TMEM196Q5HYL7 178 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 NEPROQ6NW34 567 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 LYSMD3Q7Z3D4 306 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 CALML6Q8TD86 181 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 MSANTD3Q96H12 275 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 TBATAQ96M53 351 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 LYSMD1Q96S90 227 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 ZFYVE1Q9HBF4 777 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 SLC2A4RGQ9NR83 387 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 BPTFQ12830 3046 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 CKAP5Q14008 2032 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 TSPAN11A1L157 253 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 FAM86C2PA6NEL3 165 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 ANTXRLA6NF34 631 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 KPNA3O00505 521 aaPredicted RBP22.29■■□□□ 1.16
ATG4D-209ENST00000588857 CCL22O00626 93 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 KRT38O76015 456 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 HMGCLP35914 325 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 GP5P40197 560 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 KIR2DL1P43626 348 aaPredicted RBP22.29■■□□□ 1.16
ATG4D-209ENST00000588857 ARSDP51689 593 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 ENPP2Q13822 863 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 UGP2Q16851 508 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 SDE2Q6IQ49 451 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 PACS1Q6VY07 963 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 STRA8Q7Z7C7 330 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 CNPY4Q8N129 248 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 OTUD6BQ8N6M0 293 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 KCNV2Q8TDN2 545 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 EZH1Q92800 747 aaPredicted RBP22.29■■□□□ 1.16
ATG4D-209ENST00000588857 MCCC1Q96RQ3 725 aaPredicted RBP22.29■■□□□ 1.16
ATG4D-209ENST00000588857 LRFN3Q9BTN0 628 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 MFSD1Q9H3U5 465 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 PRSS16Q9NQE7 514 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 POLR3BQ9NW08 1133 aaPredicted RBP22.29■■□□□ 1.16
ATG4D-209ENST00000588857 PPM1HQ9ULR3 514 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 PSAT1Q9Y617 370 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 NPIPB15A6NHN6 443 aaPredicted RBP22.28■■□□□ 1.16
ATG4D-209ENST00000588857 EGFP01133 1207 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 CNTFP26441 200 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 HADHAP40939 763 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 WASP42768 502 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 GRTP1Q5TC63 336 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 FSTL4Q6MZW2 842 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 TPRG1Q6ZUI0 275 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 CNTN4Q8IWV2 1026 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 PIP4K2CQ8TBX8 421 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 CDKN2AIPNLQ96HQ2 116 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 FAM129BQ96TA1 746 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 GGT7Q9UJ14 662 aa22.28■■□□□ 1.16
ATG4D-209ENST00000588857 SCN8AQ9UQD0 1980 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 C16orf96A6NNT2 1141 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 A8MX80 341 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 UPK3BL1B0FP48 263 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 UPK3BL2E5RIL1 263 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 SYNCRIPO60506 623 aaKnown RBP22.27■■□□□ 1.16
ATG4D-209ENST00000588857 IL1BP01584 269 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 SNRPAP09012 282 aaKnown RBP22.27■■□□□ 1.16
ATG4D-209ENST00000588857 PSMA3P25788 255 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 POM121L1PQ3SYA9 428 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 C2orf27AQ580R0 203 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 ZNF470Q6ECI4 717 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 PTAR1Q7Z6K3 402 aaPredicted RBP22.27■■□□□ 1.16
ATG4D-209ENST00000588857 TTC7BQ86TV6 843 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 LMNTD2Q8IXW0 634 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 MTBPQ96DY7 904 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 PPP1R16AQ96I34 528 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 SUDS3Q9H7L9 328 aaPredicted RBP22.27■■□□□ 1.16
ATG4D-209ENST00000588857 BPIFA1Q9NP55 256 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 IL17CQ9P0M4 197 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 SORCS3Q9UPU3 1222 aa22.27■■□□□ 1.16
ATG4D-209ENST00000588857 A0A0U1RQS6 177 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 CCDC162PA2VCL2 907 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 C1QTNF3-AMACRE9PGA6 284 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 CLDN7O95471 211 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 GOT2P00505 430 aaKnown RBP22.26■■□□□ 1.15
ATG4D-209ENST00000588857 CYP2A6P11509 494 aaPredicted RBP22.26■■□□□ 1.15
ATG4D-209ENST00000588857 TIMP2P16035 220 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 ITGB7P26010 798 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 HPDP32754 393 aaPredicted RBP22.26■■□□□ 1.15
ATG4D-209ENST00000588857 CDKN3Q16667 212 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 SLC44A4Q53GD3 710 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 AFTPHQ6ULP2 937 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 CRTC1Q6UUV9 634 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 TRABD2AQ86V40 505 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 EXOC3L1Q86VI1 746 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 SRRM1Q8IYB3 904 aaKnown RBP22.26■■□□□ 1.15
ATG4D-209ENST00000588857 OR4L1Q8NH43 312 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 DYRK4Q9NR20 520 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 SENP1Q9P0U3 644 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 SARDHQ9UL12 918 aa22.26■■□□□ 1.15
ATG4D-209ENST00000588857 FOXO6A8MYZ6 492 aa22.25■■□□□ 1.15
ATG4D-209ENST00000588857 PRR33A8MZF0 331 aa22.25■■□□□ 1.15
ATG4D-209ENST00000588857 POLR3GO15318 223 aaPredicted RBP22.25■■□□□ 1.15
ATG4D-209ENST00000588857 MT-ND3P03897 115 aa22.25■■□□□ 1.15
ATG4D-209ENST00000588857 NTSR1P30989 418 aa22.25■■□□□ 1.15
ATG4D-209ENST00000588857 SPRP35270 261 aaPredicted RBP22.25■■□□□ 1.15
ATG4D-209ENST00000588857 CSE1LP55060 971 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms