RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 MPP3Q13368 585 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 ARHGEF7Q14155 803 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 DENND2CQ68D51 928 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 RFLNAQ6ZTI6 216 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 TECPR1Q7Z6L1 1165 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 KLHDC8BQ8IXV7 354 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 PELI3Q8N2H9 469 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 PLA2G15Q8NCC3 412 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 DTD2Q96FN9 168 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 IFT43Q96FT9 208 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 PBKQ96KB5 322 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 ELF4Q99607 663 aaPredicted RBP20.22■□□□□ 0.83
DDX39A-207ENST00000588542 KCND1Q9NSA2 647 aa20.22■□□□□ 0.83
DDX39A-207ENST00000588542 MYLKQ15746 1914 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 A0A1B0GTQ1 180 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 CLDN7O95471 211 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 EPOP01588 193 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 CD59P13987 128 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 ZNF30P17039 623 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 SDHBP21912 280 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 MSNP26038 577 aaKnown RBP20.21■□□□□ 0.83
DDX39A-207ENST00000588542 ETV3P41162 512 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 STC1P52823 247 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 SNX1Q13596 522 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 INPP5AQ14642 412 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 CCNG2Q16589 344 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 LONRF2Q1L5Z9 754 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 Q6ZVL8 140 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 DCP2Q8IU60 420 aaKnown RBP20.21■□□□□ 0.83
DDX39A-207ENST00000588542 IPMKQ8NFU5 416 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 MAIP1Q8WWC4 291 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 MS4A14Q96JA4 679 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 OSBPL9Q96SU4 736 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 RTKNQ9BST9 563 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 TM7SF3Q9NS93 570 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 ZKSCAN5Q9Y2L8 839 aa20.21■□□□□ 0.83
DDX39A-207ENST00000588542 SPTY2D1-AS1A0A0U1RR47 76 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 DFNA5O60443 496 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 ANXA9O76027 345 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 METTL18O95568 372 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 PCCBP05166 539 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 PIRTP0C851 137 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 STIP1P31948 543 aaKnown RBP20.2■□□□□ 0.82
DDX39A-207ENST00000588542 CHRNA4P43681 627 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 RXRGP48443 463 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 GEMP55040 296 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 YPEL5P62699 121 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 SLC14A1Q13336 389 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 MTM1Q13496 603 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 FZD2Q14332 565 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 SIRPB2Q5JXA9 342 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 ESRP1Q6NXG1 681 aaKnown RBP20.2■□□□□ 0.82
DDX39A-207ENST00000588542 DRICH1Q6PGQ1 229 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-207ENST00000588542 COG1Q8WTW3 980 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 EID2BQ96D98 161 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 NUS1Q96E22 293 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 WDR24Q96S15 920 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 CAAP1Q9H8G2 361 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 MAGEE1Q9HCI5 957 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 TTC7AQ9ULT0 858 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-207ENST00000588542 SNX12Q9UMY4 172 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 ZNF148Q9UQR1 794 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 PCNX2A6NKB5 2137 aa20.2■□□□□ 0.82
DDX39A-207ENST00000588542 CNOT1A5YKK6 2376 aaKnown RBP20.19■□□□□ 0.82
DDX39A-207ENST00000588542 C1orf232A0A0U1RR37 186 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 K7ESM1 405 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 TOR1BO14657 336 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 AGTP01019 485 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 ITGAVP06756 1048 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 ADRA1AP35348 466 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 ID4P47928 161 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 GNG11P61952 73 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 IL9RQ01113 521 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 OLIG2Q13516 323 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 PDE1CQ14123 709 aaPredicted RBP20.19■□□□□ 0.82
DDX39A-207ENST00000588542 SLC1A5Q15758 541 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 DBX2Q6ZNG2 339 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 ARHGEF18Q6ZSZ5 1173 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 LYSMD3Q7Z3D4 306 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 PIP4P1Q86T03 277 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 C17orf53Q8N3J3 647 aaPredicted RBP20.19■□□□□ 0.82
DDX39A-207ENST00000588542 OXR1Q8N573 874 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 PRELID2Q8N945 189 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 APOOQ9BUR5 198 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 KCTD5Q9NXV2 234 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 AAR2Q9Y312 384 aaKnown RBP20.19■□□□□ 0.82
DDX39A-207ENST00000588542 PCDHGB2Q9Y5G2 931 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 SPO11Q9Y5K1 396 aa20.19■□□□□ 0.82
DDX39A-207ENST00000588542 ARID1BQ8NFD5 2236 aaPredicted RBP20.19■□□□□ 0.82
DDX39A-207ENST00000588542 BPTFQ12830 3046 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 TRIM23P36406 574 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 CCT8P50990 548 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 PRPSAP1Q14558 356 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 PARP6Q2NL67 630 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 P3H1Q32P28 736 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 CCDC70Q6NSX1 233 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 PNCKQ6P2M8 343 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 RANBP10Q6VN20 620 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 RAVER1Q8IY67 606 aaKnown RBP20.18■□□□□ 0.82
DDX39A-207ENST00000588542 SLC25A41Q8N5S1 370 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms