RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 MTG2Q9H4K7 406 aa10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 PCDH12Q9NPG4 1184 aa10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 ITM2CQ9NQX7 267 aa10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 NLE1Q9NVX2 485 aaPredicted RBP10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 SYBUQ9NX95 663 aa10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 FBXL12Q9NXK8 326 aa10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 USP36Q9P275 1121 aaKnown RBP10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 BCCIPQ9P287 314 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 B4GALT6Q9UBX8 382 aa10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 MTF2Q9Y483 593 aaPredicted RBP10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 RPS6KL1Q9Y6S9 549 aa10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 ATG2BQ96BY7 2078 aa10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 TRIOO75962 3097 aa10.36□□□□□ -0.75
CLPTM1-207ENST00000587537 PLXND1Q9Y4D7 1925 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 NPIPB15A6NHN6 443 aaPredicted RBP10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 AVILO75366 819 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 RPP40O75818 363 aaKnown RBP10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 MYBL2P10244 700 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 GABRG2P18507 467 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 COL9A1P20849 921 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 ABL2P42684 1182 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 ZNF140P52738 457 aaPredicted RBP10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 STC1P52823 247 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 RPS21P63220 83 aaKnown RBP10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 PRAMEP78395 509 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 ITGA9Q13797 1035 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 SEPT6Q14141 434 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 STAT4Q14765 748 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 CRYMQ14894 314 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 LONRF1Q17RB8 773 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 KLHL38Q2WGJ6 581 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 GPR33Q49SQ1 333 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 ANKRD20A4Q4UJ75 823 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 MSS51Q4VC12 460 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 LYPLAL1Q5VWZ2 237 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 LRRC66Q68CR7 880 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 DENND2CQ68D51 928 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 AFTPHQ6ULP2 937 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 CRTC1Q6UUV9 634 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 KIAA1324Q6UXG2 1013 aaKnown RBP10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 Q6ZS52 159 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 KIAA0408Q6ZU52 694 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 C3orf62Q6ZUJ4 267 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 GALNT7Q86SF2 657 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 ZSWIM9Q86XI8 627 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 TTC30BQ8N4P2 665 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 AADATQ8N5Z0 425 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 FAM174AQ8TBP5 190 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 SPACA7Q96KW9 195 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 TCF12Q99081 682 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 CYTH2Q99418 400 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 FAM167BQ9BTA0 163 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 BTBD1Q9H0C5 482 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 ACBD3Q9H3P7 528 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 CDC42EP4Q9H3Q1 356 aaKnown RBP10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 TREX1Q9NSU2 369 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 IL17CQ9P0M4 197 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 DLGAP2Q9P1A6 1054 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 CHMP2BQ9UQN3 213 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 FADS3Q9Y5Q0 445 aa10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 ZNF106Q9H2Y7 1883 aaKnown RBP10.35□□□□□ -0.75
CLPTM1-207ENST00000587537 A0A1W2PP55 124 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 F8W8V4 182 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 TOR1BO14657 336 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 WNT9AO14904 365 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 RIPK2O43353 540 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 NUDT17P0C025 328 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 FAM153BP0C7A2 387 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 TPH1P17752 444 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 CTPS1P17812 591 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 TEAD1P28347 426 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 SPAM1P38567 509 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 SPINT3P49223 89 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 TPMTP51580 245 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 DPTQ07507 201 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 MGAT5Q09328 741 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 MTAPQ13126 283 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 GAS6Q14393 721 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 NAA30Q147X3 362 aaPredicted RBP10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 CDKN3Q16667 212 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 FAM153CQ494X1 144 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 USP39Q53GS9 565 aaKnown RBP10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 BEND6Q5SZJ8 279 aaPredicted RBP10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 RNF187Q5TA31 235 aaPredicted RBP10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 ALS2CLQ60I27 953 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 CWF19L1Q69YN2 538 aaKnown RBP10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 MRNIPQ6NTE8 343 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 LIPIQ6XZB0 460 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 SLC36A4Q6YBV0 504 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 CERS6Q6ZMG9 384 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 UNC5AQ6ZN44 842 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 LYSMD3Q7Z3D4 306 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 SDCCAG8Q86SQ7 713 aaPredicted RBP10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 SLC26A11Q86WA9 606 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 TRIM69Q86WT6 500 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 PGBD3Q8N328 593 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 DENND6BQ8NEG7 585 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 MDGA1Q8NFP4 955 aa10.34□□□□□ -0.75
CLPTM1-207ENST00000587537 OR2T34Q8NGX1 318 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms