RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 SUDS3Q9H7L9 328 aaPredicted RBP15.73■□□□□ 0.11
VAT1-205ENST00000587173 KCTD5Q9NXV2 234 aa15.73■□□□□ 0.11
VAT1-205ENST00000587173 ACSL6Q9UKU0 697 aa15.73■□□□□ 0.11
VAT1-205ENST00000587173 ATMQ13315 3056 aa15.72■□□□□ 0.11
VAT1-205ENST00000587173 HELZ2Q9BYK8 2649 aaKnown RBP15.72■□□□□ 0.11
VAT1-205ENST00000587173 TTC24A2A3L6 582 aaPredicted RBP15.72■□□□□ 0.11
VAT1-205ENST00000587173 DDX3XO00571 662 aaKnown RBP eCLIP15.72■□□□□ 0.112e-26■■■■■ 30.6
VAT1-205ENST00000587173 SKILP12757 684 aa15.72■□□□□ 0.11
VAT1-205ENST00000587173 ITIH1P19827 911 aa15.72■□□□□ 0.11
VAT1-205ENST00000587173 SLC10A7Q0GE19 358 aa15.72■□□□□ 0.11
VAT1-205ENST00000587173 SRSF6Q13247 344 aaKnown RBP15.72■□□□□ 0.11
VAT1-205ENST00000587173 DPYSQ14117 519 aa15.72■□□□□ 0.11
VAT1-205ENST00000587173 TMCO3Q6UWJ1 677 aa15.72■□□□□ 0.11
VAT1-205ENST00000587173 KIAA1524Q8TCG1 905 aa15.72■□□□□ 0.11
VAT1-205ENST00000587173 COQ10AQ96MF6 247 aa15.72■□□□□ 0.11
VAT1-205ENST00000587173 CARS2Q9HA77 564 aaKnown RBP15.72■□□□□ 0.11
VAT1-205ENST00000587173 TMEM63CQ9P1W3 806 aa15.72■□□□□ 0.11
VAT1-205ENST00000587173 BZW2Q9Y6E2 419 aaKnown RBP15.72■□□□□ 0.11
VAT1-205ENST00000587173 LRP4O75096 1905 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 PRAMEF33A0A0G2JMD5 474 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 A0A1B0GTH6 734 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 NVLO15381 856 aaKnown RBP15.71■□□□□ 0.11
VAT1-205ENST00000587173 HTRA2O43464 458 aaPredicted RBP15.71■□□□□ 0.11
VAT1-205ENST00000587173 NUDT21O43809 227 aaKnown RBP15.71■□□□□ 0.11
VAT1-205ENST00000587173 PRAMEF10O60809 474 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 CPP00450 1065 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 LIPCP11150 499 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 MYCLP1P12525 358 aaPredicted RBP15.71■□□□□ 0.11
VAT1-205ENST00000587173 KRT10P13645 584 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 PTMSP20962 102 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 AMPD1P23109 780 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 ETV5P41161 510 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 MAZP56270 477 aaKnown RBP15.71■□□□□ 0.11
VAT1-205ENST00000587173 TPM4P67936 248 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 PIGHQ14442 188 aaPredicted RBP15.71■□□□□ 0.11
VAT1-205ENST00000587173 CNGA3Q16281 694 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 DPYSL2Q16555 572 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 TSR1Q2NL82 804 aaKnown RBP15.71■□□□□ 0.11
VAT1-205ENST00000587173 MAP9Q49MG5 647 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 DENND2CQ68D51 928 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 TMPRSS9Q7Z410 1059 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 PDCD6IPQ8WUM4 868 aaKnown RBP15.71■□□□□ 0.11
VAT1-205ENST00000587173 HSPH1Q92598 858 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 TMEM159Q96B96 161 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 NAP1L5Q96NT1 182 aaPredicted RBP15.71■□□□□ 0.11
VAT1-205ENST00000587173 CMKLR1Q99788 373 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 ISCUQ9H1K1 167 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 PHPT1Q9NRX4 125 aaPredicted RBP15.71■□□□□ 0.11
VAT1-205ENST00000587173 PCDHGC4Q9Y5F7 938 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 ZNF462Q96JM2 2506 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 KIF26BQ2KJY2 2108 aa15.71■□□□□ 0.11
VAT1-205ENST00000587173 LRRK1Q38SD2 2015 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 SOCS5O75159 536 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 HEXIM1O94992 359 aaKnown RBP15.7■□□□□ 0.1
VAT1-205ENST00000587173 CYP2A6P11509 494 aaPredicted RBP15.7■□□□□ 0.1
VAT1-205ENST00000587173 CCNB1P14635 433 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 VIPR1P32241 457 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 SERPINB6P35237 376 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 B4GALNT1Q00973 533 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 NR1I3Q14994 352 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 TDRD12Q587J7 1177 aaKnown RBP15.7■□□□□ 0.1
VAT1-205ENST00000587173 FIGNQ5HY92 759 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 PHF19Q5T6S3 580 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 USP53Q70EK8 1073 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 POLNQ7Z5Q5 900 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 HEATR4Q86WZ0 1026 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 SLITRK4Q8IW52 837 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 NDUFAF2Q8N183 169 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 GPBAR1Q8TDU6 330 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 SPOCK2Q92563 424 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 NUDCD1Q96RS6 583 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 GSDMCQ9BYG8 508 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 SEMA6CQ9H3T2 930 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.7■□□□□ 0.1
VAT1-205ENST00000587173 SPATS2LQ9NUQ6 558 aaKnown RBP15.7■□□□□ 0.1
VAT1-205ENST00000587173 SEPT10Q9P0V9 454 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 PHTF1Q9UMS5 762 aa15.7■□□□□ 0.1
VAT1-205ENST00000587173 GOLGA6CA6NDK9 693 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 GOLGA6BA6NDN3 693 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 PEX11BO96011 259 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 CEACAM5P06731 702 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 GOLGA6DP0CG33 693 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 CR2P20023 1033 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 IL1R2P27930 398 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 GNPDA1P46926 289 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 MAPK10P53779 464 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 ILF3Q12906 894 aaKnown RBP eCLIP15.69■□□□□ 0.1
VAT1-205ENST00000587173 SMTNL2Q2TAL5 461 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 AMZ1Q400G9 498 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 RALGPS1Q5JS13 557 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 MARC1Q5VT66 337 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 E4F1Q66K89 784 aaPredicted RBP15.69■□□□□ 0.1
VAT1-205ENST00000587173 ZFAND4Q86XD8 727 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 NRROSQ86YC3 692 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 PGBD5Q8N414 524 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 ATPAF2Q8N5M1 289 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 ZDHHC1Q8WTX9 485 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 USP7Q93009 1102 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 SGF29Q96ES7 293 aa15.69■□□□□ 0.1
VAT1-205ENST00000587173 DTD2Q96FN9 168 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms