RNA–Protein interactions for RNA: ENST00000584692.1

RHOT1-216, Transcript of ras homolog family member T1, human

TSL 2

Gene RHOT1, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-216	ENST00000584692	C6orf141	Q5SZD1	244 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	HIST2H2BC	Q6DN03	193 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	HIST2H2BD	Q6DRA6	164 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	CCDC70	Q6NSX1	233 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	CDC73	Q6P1J9	531 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	METTL2B	Q6P1Q9	378 aa	Known RBP	4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	SPSB3	Q6PJ21	355 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	METTL6	Q8TCB7	284 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	PSPC1	Q8WXF1	523 aa	Known RBP	4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	BICD1	Q96G01	975 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	METTL2A	Q96IZ6	378 aa	Known RBP	4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	ZNF385A	Q96PM9	386 aa	Known RBP	4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	OR1F2P	Q96R84	312 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	SH3GL2	Q99962	352 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	UNC45A	Q9H3U1	944 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	ZNF556	Q9HAH1	456 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	SLC6A13	Q9NSD5	602 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	SMARCAL1	Q9NZC9	954 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	ABI3	Q9P2A4	366 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	HAO1	Q9UJM8	370 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	TINAG	Q9UJW2	476 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	PROCR	Q9UNN8	238 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	AAR2	Q9Y312	384 aa	Known RBP	4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	SNX9	Q9Y5X1	595 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	CEPT1	Q9Y6K0	416 aa		4.89	□□□□□ -1.63
RHOT1-216	ENST00000584692	PLSCR5	A0PG75	271 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	SOCS6	O14544	535 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	KDM4B	O94953	1096 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	CLDN14	O95500	239 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	PMS2P2	O95744	297 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	FTCD	O95954	541 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	G6PD	P11413	515 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	ICAM3	P32942	547 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	RPL7A	P62424	266 aa	Known RBP	4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	SORD	Q00796	357 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	EEF1A2	Q05639	463 aa	Known RBP	4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	NAE1	Q13564	534 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	PAPPA-AS1	Q5QFB9	102 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	FAM122C	Q6P4D5	195 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	ATF7IP	Q6VMQ6	1270 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	TAOK1	Q7L7X3	1001 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	CHERP	Q8IWX8	916 aa	Known RBP	4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	SPATA6L	Q8N4H0	392 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	NEK9	Q8TD19	979 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	GTF3C6	Q969F1	213 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	IGSF21	Q96ID5	467 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	CSF3R	Q99062	836 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	PIP5K1A	Q99755	562 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	STRA6	Q9BX79	667 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	SLC26A6	Q9BXS9	759 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	MMP25	Q9NPA2	562 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	GPR108	Q9NPR9	543 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	HINT3	Q9NQE9	182 aa	Known RBP	4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	ZNF224	Q9NZL3	707 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	C1RL	Q9NZP8	487 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	ERVK-11	Q9UQG0	969 aa		4.88	□□□□□ -1.63
RHOT1-216	ENST00000584692	DENND3	A2RUS2	1198 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692		J3KRW8	73 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	LINC00271	P0C7V0	271 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	PIP4K2A	P48426	406 aa	Predicted RBP	4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	CCR9	P51686	369 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	SEC61B	P60468	96 aa	Known RBP	4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	MPP1	Q00013	466 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	POU5F1B	Q06416	359 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	ZNF155	Q12901	538 aa	Predicted RBP	4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	ILF3	Q12906	894 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	OLIG2	Q13516	323 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	DRAP1	Q14919	205 aa	Predicted RBP	4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	COL28A1	Q2UY09	1125 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	SLC45A4	Q5BKX6	768 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	GGNBP1	Q5YKI7	109 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	DSEL	Q8IZU8	1212 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	SPATA22	Q8NHS9	363 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	MAGEC3	Q8TD91	643 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	RND1	Q92730	232 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	TANK	Q92844	425 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	KXD1	Q9BQD3	176 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	IFIH1	Q9BYX4	1025 aa	Known RBP	4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	RANBP17	Q9H2T7	1088 aa	Known RBP	4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	PPP1R3E	Q9H7J1	279 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	PCDH9	Q9HC56	1237 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	SIX4	Q9UIU6	781 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692	MKLN1	Q9UL63	735 aa		4.87	□□□□□ -1.63
RHOT1-216	ENST00000584692		A0A1W2PRG0	241 aa		4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	GOLGA6L9	A6NEM1	432 aa		4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692		B4E171	279 aa		4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	SNAP23	O00161	211 aa		4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	MID1	O15344	667 aa		4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	PAGE4	O60829	102 aa		4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	RTN3	O95197	1032 aa	Predicted RBP	4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	AFP	P02771	609 aa	Known RBP	4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	SNRNP70	P08621	437 aa	Known RBP	4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	KRT9	P35527	623 aa		4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	TSPAN7	P41732	249 aa		4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	OLR1	P78380	273 aa		4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	RPL36A	P83881	106 aa	Known RBP	4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	TNFAIP1	Q13829	316 aa		4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	CCNG2	Q16589	344 aa		4.86	□□□□□ -1.63
RHOT1-216	ENST00000584692	WDR73	Q6P4I2	378 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms