RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 TM4SF1P30408 202 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 ARRB2P32121 409 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 MEA1Q16626 185 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 EIF2S3LQ2VIR3 472 aaKnown RBP5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 C6orf141Q5SZD1 244 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 AWAT2Q6E213 333 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 WDR63Q8IWG1 891 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 NEXN-AS1Q8NBZ9 246 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 OR14A16Q8NHC5 309 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 ARHGEF26Q96DR7 871 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 IFIH1Q9BYX4 1025 aaKnown RBP5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 ESRP2Q9H6T0 727 aaKnown RBP5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 SYNCQ9H7C4 482 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 MRPL44Q9H9J2 332 aaKnown RBP5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 HINT3Q9NQE9 182 aaKnown RBP5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 ADD3Q9UEY8 706 aaKnown RBP5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 VPS28Q9UK41 221 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 CDC14AQ9UNH5 594 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 EVPLQ92817 2033 aa5.69□□□□□ -1.5
SMARCE1-219ENST00000583294 DYTNA2CJ06 578 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 FAM90A8PA6NJQ4 464 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 VCYO14598 125 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 CLTBP09497 229 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 FAM90A13PP0C7W8 464 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 FAM90A24PP0C7X0 464 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 CDH2P19022 906 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 BDNFP23560 247 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 MCM3P25205 808 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 HOXD13P35453 343 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 AMTP48728 403 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 PCYT1AP49585 367 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 MXI1P50539 228 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 PGGT1BP53609 377 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 GALCP54803 685 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 PDE1CQ14123 709 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 CRYMQ14894 314 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 SHBQ15464 509 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 ZSCAN23Q3MJ62 389 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 SPATA1Q5VX52 437 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 ZC3HC1Q86WB0 502 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 SCARB1Q8WTV0 552 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 IGSF8Q969P0 613 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 SMARCAD1Q9H4L7 1026 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 MYO6Q9UM54 1294 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 MTMR6Q9Y217 621 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 R3HDM2Q9Y2K5 976 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 MAU2Q9Y6X3 613 aa5.68□□□□□ -1.5
SMARCE1-219ENST00000583294 C1orf226A1L170 272 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 CH25HO95992 272 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 LDHCP07864 332 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 GPTP24298 496 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 C21orf33P30042 268 aaPredicted RBP5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 HNRNPH1P31943 449 aaKnown RBP5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 GARSP41250 739 aaKnown RBP5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 PIK3CAP42336 1068 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 METAP2P50579 478 aaKnown RBP eCLIP5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 CDH8P55286 799 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 PRAMEP78395 509 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 MC1RQ01726 317 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 CREB5Q02930 508 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 PRKG2Q13237 762 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 EFNB3Q15768 340 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 CDONQ4KMG0 1287 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 TMEM154Q6P9G4 183 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 SARM1Q6SZW1 724 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 CHST9Q7L1S5 443 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 FJX1Q86VR8 437 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 DSELQ8IZU8 1212 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 SPATA6LQ8N4H0 392 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 NSMCE1Q8WV22 266 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 RND1Q92730 232 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 RRNAD1Q96FB5 475 aaKnown RBP5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 PPP1R13BQ96KQ4 1090 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 LRFN5Q96NI6 719 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 KCNN2Q9H2S1 579 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 PDZD7Q9H5P4 517 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 TERF2IPQ9NYB0 399 aa5.67□□□□□ -1.5
SMARCE1-219ENST00000583294 hDV102S1A0JD36 115 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 H3BQ06 376 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 NDUFS3O75489 264 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 FTCDO95954 541 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 ALOX12P18054 663 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 UBA7P41226 1012 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 KCNJ4P48050 445 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 LINC00205P59089 165 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 Q0VFX4 171 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 NAB2Q15742 525 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 TDRD12Q587J7 1177 aaKnown RBP5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 RILPL1Q5EBL4 403 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 GLDNQ6ZMI3 551 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 PQLC2Q6ZP29 291 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 HARBI1Q96MB7 349 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 PCGF1Q9BSM1 259 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 PPP1R3EQ9H7J1 279 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 CNGB3Q9NQW8 809 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 SLC9A2Q9UBY0 812 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 SLC45A1Q9Y2W3 748 aa5.66□□□□□ -1.5
SMARCE1-219ENST00000583294 LINC01553A4QN01 128 aa5.65□□□□□ -1.5
SMARCE1-219ENST00000583294 GJB3O75712 270 aa5.65□□□□□ -1.5
SMARCE1-219ENST00000583294 SERPINI2O75830 405 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms