RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 PCDHGB7Q9Y5F8 929 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 ARHGEF17Q96PE2 2063 aaPredicted RBP14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 A8MX80 341 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 KLRC4O43908 158 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 RECQL5O94762 991 aaPredicted RBP14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 POP4O95707 220 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 CCNYL3P0C7X3 344 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 GTF2H1P32780 548 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 GARSP41250 739 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 ACTR1BP42025 376 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 GPD2P43304 727 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 ART1P52961 327 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 ACTR1AP61163 376 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 GNA12Q03113 381 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 POLD3Q15054 466 aaPredicted RBP14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 DOK6Q6PKX4 331 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 FNIP1Q8TF40 1166 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 ITLN2Q8WWU7 325 aaPredicted RBP14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 THAP4Q8WY91 577 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 ARHGEF2Q92974 986 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 EXOC2Q96KP1 924 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 TMUB1Q9BVT8 246 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 OSBPL1AQ9BXW6 950 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 TKTL2Q9H0I9 626 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 WDR26Q9H7D7 661 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 PIGVQ9NUD9 493 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 GPR83Q9NYM4 423 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 PADI1Q9ULC6 663 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 B3GNT3Q9Y2A9 372 aa14.03□□□□□ -0.16
CSNK1D-213ENST00000580446 STAB1Q9NY15 2570 aa14.02□□□□□ -0.16
CSNK1D-213ENST00000580446 FAM170AA1A519 330 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 ILVBLA1L0T0 632 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 TNFRSF10CO14798 259 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 CALUO43852 315 aaPredicted RBP14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 GSRP00390 522 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 CEACAM5P06731 702 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 KELP23276 732 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 STAT1P42224 750 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 SNRPD1P62314 119 aaKnown RBP14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 SLC20A2Q08357 652 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 ART3Q13508 389 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 CRB2Q5IJ48 1285 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 WDR74Q6RFH5 385 aaPredicted RBP14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 Q71RC1 249 aaPredicted RBP14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 BEND5Q7L4P6 421 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 PHLDB2Q86SQ0 1253 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 CUZD1Q86UP6 607 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 ZSWIM9Q86XI8 627 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 ARHGEF38Q9NXL2 777 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 ZNF212Q9UDV6 495 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 KIAA1257Q9ULG3 409 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 PCDHGB6Q9Y5F9 930 aa14.02□□□□□ -0.17
CSNK1D-213ENST00000580446 DRGXA6NNA5 263 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 C19orf84I3L1E1 186 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 SPAG6O75602 509 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 PLEKP08567 350 aaPredicted RBP14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 PAEPP09466 180 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 PTPN4P29074 926 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 ADCY8P40145 1251 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 RPL34P49207 117 aaKnown RBP14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 YWHAEP62258 255 aaKnown RBP14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 RAPGEF1Q13905 1077 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 LLGL1Q15334 1064 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 VWA2Q5GFL6 755 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 DUS1LQ6P1R4 473 aaKnown RBP14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 KCNMB4Q86W47 210 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 PARP9Q8IXQ6 854 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 IQUBQ8NA54 791 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 TMEM174Q8WUU8 243 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 TMX3Q96JJ7 454 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 SLC2A13Q96QE2 648 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 BARD1Q99728 777 aaKnown RBP14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 TBC1D10AQ9BXI6 508 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 BRD8Q9H0E9 1235 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 CUEDC2Q9H467 287 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 THAP9Q9H5L6 903 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 EXOC1Q9NV70 894 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 SMC3Q9UQE7 1217 aa14.01□□□□□ -0.17
CSNK1D-213ENST00000580446 PVALEFA0A1B0GWK0 134 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 MAPK13O15264 365 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 POLR2DO15514 142 aaKnown RBP14□□□□□ -0.17
CSNK1D-213ENST00000580446 TMEM63AO94886 807 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 CD1EP15812 388 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 GM2AP17900 193 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 CA5AP35218 305 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 PSMC2P35998 433 aaKnown RBP14□□□□□ -0.17
CSNK1D-213ENST00000580446 MMP12P39900 470 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 ELP6Q0PNE2 266 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 LAMB3Q13751 1172 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 SLC39A14Q15043 492 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 TSR1Q2NL82 804 aaKnown RBP14□□□□□ -0.17
CSNK1D-213ENST00000580446 DCAF17Q5H9S7 520 aaPredicted RBP14□□□□□ -0.17
CSNK1D-213ENST00000580446 GUF1Q8N442 669 aaKnown RBP14□□□□□ -0.17
CSNK1D-213ENST00000580446 ISG20Q96AZ6 181 aaKnown RBP14□□□□□ -0.17
CSNK1D-213ENST00000580446 FAXDC2Q96IV6 333 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 GDAP1L1Q96MZ0 367 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 TRIM62Q9BVG3 475 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 PCDHGA10Q9Y5H3 936 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 CSAG2Q9Y5P2 127 aa14□□□□□ -0.17
CSNK1D-213ENST00000580446 KLF2Q9Y5W3 355 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms