RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 CBX2Q14781 532 aaPredicted RBP15.21■□□□□ 0.03
ITGB4-206ENST00000579662 RHBDF2Q6PJF5 856 aa15.21■□□□□ 0.03
ITGB4-206ENST00000579662 OTOP3Q7RTS5 596 aa15.21■□□□□ 0.03
ITGB4-206ENST00000579662 PROSER1Q86XN7 944 aa15.21■□□□□ 0.03
ITGB4-206ENST00000579662 PYDC1Q8WXC3 89 aa15.21■□□□□ 0.03
ITGB4-206ENST00000579662 TEKT5Q96M29 485 aa15.21■□□□□ 0.03
ITGB4-206ENST00000579662 TMEM109Q9BVC6 243 aa15.21■□□□□ 0.03
ITGB4-206ENST00000579662 MFHAS1Q9Y4C4 1052 aa15.21■□□□□ 0.03
ITGB4-206ENST00000579662 GRIA3P42263 894 aa15.21■□□□□ 0.02
ITGB4-206ENST00000579662 AP1S1P61966 158 aa15.21■□□□□ 0.02
ITGB4-206ENST00000579662 GNA12Q03113 381 aa15.21■□□□□ 0.02
ITGB4-206ENST00000579662 CCDC185Q8N715 623 aa15.21■□□□□ 0.02
ITGB4-206ENST00000579662 SEMA6AQ9H2E6 1030 aa15.21■□□□□ 0.02
ITGB4-206ENST00000579662 ZFP14Q9HCL3 533 aa15.21■□□□□ 0.02
ITGB4-206ENST00000579662 TCAF1Q9Y4C2 921 aa15.21■□□□□ 0.02
ITGB4-206ENST00000579662 TRAF6Q9Y4K3 522 aa15.21■□□□□ 0.02
ITGB4-206ENST00000579662 PRNPP04156 253 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 SLC20A2Q08357 652 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 AP5B1Q2VPB7 878 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 CEP78Q5JTW2 689 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 VARS2Q5ST30 1063 aaKnown RBP15.2■□□□□ 0.02
ITGB4-206ENST00000579662 CAPN13Q6MZZ7 669 aaPredicted RBP15.2■□□□□ 0.02
ITGB4-206ENST00000579662 APTXQ7Z2E3 356 aaKnown RBP15.2■□□□□ 0.02
ITGB4-206ENST00000579662 IQCKQ8N0W5 287 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 ZBTB2Q8N680 514 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 WDR36Q8NI36 951 aaKnown RBP15.2■□□□□ 0.02
ITGB4-206ENST00000579662 NACC2Q96BF6 587 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 RNFT2Q96EX2 444 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 VMP1Q96GC9 406 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 RHBGQ9H310 441 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.2■□□□□ 0.02
ITGB4-206ENST00000579662 ASF1AQ9Y294 204 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 ATG13O75143 517 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 EIF3MQ7L2H7 374 aaKnown RBP15.2■□□□□ 0.02
ITGB4-206ENST00000579662 CMC1Q7Z7K0 106 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 GATAD2AQ86YP4 633 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 CAMKK1Q8N5S9 505 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 TFAP2BQ92481 460 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 TBC1D10AQ9BXI6 508 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 PHPT1Q9NRX4 125 aaPredicted RBP15.2■□□□□ 0.02
ITGB4-206ENST00000579662 SNED1Q8TER0 1413 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 EPORP19235 508 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 UBAP2LQ14157 1087 aaKnown RBP15.2■□□□□ 0.02
ITGB4-206ENST00000579662 RNASEH2BQ5TBB1 312 aaKnown RBP15.2■□□□□ 0.02
ITGB4-206ENST00000579662 ADGRD1Q6QNK2 874 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 CRELD2Q6UXH1 353 aaPredicted RBP15.2■□□□□ 0.02
ITGB4-206ENST00000579662 AGMOQ6ZNB7 445 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 OR4K2Q8NGD2 314 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 C19orf60Q96EN9 201 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 RTKNQ9BST9 563 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 FBXW11Q9UKB1 542 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 UMPSP11172 480 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 HNRNPLP14866 589 aaKnown RBP eCLIP15.2■□□□□ 0.02
ITGB4-206ENST00000579662 IL10RBQ08334 325 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 TIMM50Q3ZCQ8 353 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 TRIM40Q6P9F5 258 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 CHST9Q7L1S5 443 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 NIPA2Q8N8Q9 360 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 C19orf18Q8NEA5 215 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 SLITRK2Q9H156 845 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 RERGLQ9H628 205 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 CAB39LQ9H9S4 337 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 SIX2Q9NPC8 291 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 PCDH12Q9NPG4 1184 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 AASDHPPTQ9NRN7 309 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 NUDT4Q9NZJ9 180 aa15.2■□□□□ 0.02
ITGB4-206ENST00000579662 OR6A2O95222 327 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 C2P06681 752 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 LINC00032P0C843 101 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 SCNN1AP37088 669 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 VN1R5Q7Z5H4 357 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 SMG7Q92540 1137 aaKnown RBP15.19■□□□□ 0.02
ITGB4-206ENST00000579662 CCDC28BQ9BUN5 200 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 PALMDQ9NP74 551 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 NPEPPSL1A6NEC2 478 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 FAM25AB3EWG3 89 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 FAM25CB3EWG5 89 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 FAM25GB3EWG6 89 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 CCL16O15467 120 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 SLC22A3O75751 556 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 LRIG2O94898 1065 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 SPATA31D3P0C874 917 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 C4BPBP20851 252 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 ADSSP30520 456 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 TTKP33981 857 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 FEN1P39748 380 aaKnown RBP15.19■□□□□ 0.02
ITGB4-206ENST00000579662 CLK3P49761 638 aaKnown RBP15.19■□□□□ 0.02
ITGB4-206ENST00000579662 FNBP1LQ5T0N5 605 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 AAGABQ6PD74 315 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 KLHL35Q6PF15 583 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 SPATA31D4Q6ZUB0 917 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 NMD3Q96D46 503 aaKnown RBP15.19■□□□□ 0.02
ITGB4-206ENST00000579662 IPO13O94829 963 aaKnown RBP15.19■□□□□ 0.02
ITGB4-206ENST00000579662 ENO2P09104 434 aaPredicted RBP15.19■□□□□ 0.02
ITGB4-206ENST00000579662 PCSK2P16519 638 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 EPHA3P29320 983 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 GCNT7Q6ZNI0 430 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 SPATA6LQ8N4H0 392 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 OR52L1Q8NGH7 329 aa15.19■□□□□ 0.02
ITGB4-206ENST00000579662 ERLEC1Q96DZ1 483 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms