RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PGLSO95336 258 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 CPP00450 1065 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 JCHAINP01591 159 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 APOC2P02655 101 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 CSF2P04141 144 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 PYGMP11217 842 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 ACTN2P35609 894 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 POLR2LP62875 67 aaKnown RBP12.82□□□□□ -0.36
CCDC57-211ENST00000578187 INSM1Q01101 510 aaPredicted RBP12.82□□□□□ -0.36
CCDC57-211ENST00000578187 NIPAL4Q0D2K0 466 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 RALGDSQ12967 914 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 RTP5Q14D33 572 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 NOMO1Q15155 1222 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 ZCCHC8Q6NZY4 707 aaKnown RBP12.82□□□□□ -0.36
CCDC57-211ENST00000578187 AADACL2Q6P093 401 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 ERAP2Q6P179 960 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 DPPA4Q7L190 304 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 SLC22A18ASQ8N1D0 253 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 TFB1MQ8WVM0 346 aaKnown RBP12.82□□□□□ -0.36
CCDC57-211ENST00000578187 GLMNQ92990 594 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 APOLD1Q96LR9 279 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 QKIQ96PU8 341 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC57-211ENST00000578187 DEPDC7Q96QD5 511 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 KLF6Q99612 283 aaPredicted RBP12.82□□□□□ -0.36
CCDC57-211ENST00000578187 HEMGNQ9BXL5 484 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 TDRD1Q9BXT4 1180 aaKnown RBP12.82□□□□□ -0.36
CCDC57-211ENST00000578187 UCKL1Q9NWZ5 548 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 PPP2R2CQ9Y2T4 447 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 TTLL3Q9Y4R7 772 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 CSNK1G3Q9Y6M4 447 aa12.82□□□□□ -0.36
CCDC57-211ENST00000578187 CFAP69A5D8W1 941 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 POM121BA6NF01 834 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 HACD1B0YJ81 288 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 TOR1BO14657 336 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 RAD51BO15315 384 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 AQP9O43315 295 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 NEBLO76041 1014 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 TM7SF2O76062 418 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 MT-CO3P00414 261 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 PRKCGP05129 697 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 MMP2P08253 660 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 NME1P15531 152 aaKnown RBP12.81□□□□□ -0.36
CCDC57-211ENST00000578187 JUNDP17535 347 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 PTPN3P26045 913 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 CETN2P41208 172 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 CLDN6P56747 220 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 ITKQ08881 620 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 XRCC4Q13426 336 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 FZD2Q14332 565 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 AGERQ15109 404 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 ZNF542PQ5EBM4 170 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 ARMC12Q5T9G4 340 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 KDM7AQ6ZMT4 941 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 DCBLD1Q8N8Z6 715 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 FAM181AQ8N9Y4 354 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 ZNF548Q8NEK5 533 aaPredicted RBP12.81□□□□□ -0.36
CCDC57-211ENST00000578187 HAUS1Q96CS2 278 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 BMFQ96LC9 184 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 MCCC1Q96RQ3 725 aaPredicted RBP12.81□□□□□ -0.36
CCDC57-211ENST00000578187 WRAP53Q9BUR4 548 aaKnown RBP12.81□□□□□ -0.36
CCDC57-211ENST00000578187 SLC13A1Q9BZW2 595 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 LZTFL1Q9NQ48 299 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 GPR27Q9NS67 375 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 SPASTQ9UBP0 616 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 PHTF1Q9UMS5 762 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 RAI2Q9Y5P3 530 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 SCN8AQ9UQD0 1980 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 FAM208BQ5VWN6 2430 aa12.81□□□□□ -0.36
CCDC57-211ENST00000578187 CABIN1Q9Y6J0 2220 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 K7ESM1 405 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 MTSS1O43312 755 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 MMP20O60882 483 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 TJP3O95049 919 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 C6P13671 934 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 EIF2S3P41091 472 aaKnown RBP12.8□□□□□ -0.36
CCDC57-211ENST00000578187 RPIAP49247 311 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 YPEL5P62699 121 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 SKOR1P84550 965 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 OTUD4Q01804 1114 aaKnown RBP12.8□□□□□ -0.36
CCDC57-211ENST00000578187 WASHC5Q12768 1159 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 KLF1Q13351 362 aaPredicted RBP12.8□□□□□ -0.36
CCDC57-211ENST00000578187 COL9A2Q14055 689 aaPredicted RBP12.8□□□□□ -0.36
CCDC57-211ENST00000578187 SLC14A2Q15849 920 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 TEX44Q53QW1 395 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 B4GALNT4Q76KP1 1039 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 ZC3H18Q86VM9 953 aaKnown RBP12.8□□□□□ -0.36
CCDC57-211ENST00000578187 LSMEM2Q8N112 164 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 PAF1Q8N7H5 531 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 TP53I13Q8NBR0 393 aaPredicted RBP12.8□□□□□ -0.36
CCDC57-211ENST00000578187 ACTL9Q8TC94 416 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 MAPK15Q8TD08 544 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 PDCD6IPQ8WUM4 868 aaKnown RBP12.8□□□□□ -0.36
CCDC57-211ENST00000578187 PIH1D2Q8WWB5 315 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 ANP32BQ92688 251 aaKnown RBP12.8□□□□□ -0.36
CCDC57-211ENST00000578187 FGF11Q92914 225 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 TADA1Q96BN2 335 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 CENPTQ96BT3 561 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 IMP4Q96G21 291 aaKnown RBP12.8□□□□□ -0.36
CCDC57-211ENST00000578187 TEKT5Q96M29 485 aa12.8□□□□□ -0.36
CCDC57-211ENST00000578187 ALS2CR12Q96Q35 445 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms