RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 GKP32189 559 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 GTF2H1P32780 548 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 IGFALSP35858 605 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ETV5P41161 510 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 GPD2P43304 727 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 RPL34P49207 117 aaKnown RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 NDUFA8P51970 172 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 PLK1P53350 603 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 SLC8A3P57103 927 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ENPEPQ07075 957 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 EIF2B5Q13144 721 aaKnown RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ADAM9Q13443 819 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 C1orf61Q13536 156 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 CLCA4Q14CN2 919 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 PLCL1Q15111 1095 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 DLG2Q15700 870 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ARL13BQ3SXY8 428 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ACCSLQ4AC99 568 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ALFQ53S48 1182 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 TCERG1LQ5VWI1 586 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 KCTD16Q68DU8 428 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 HIST2H2BCQ6DN03 193 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ZCCHC8Q6NZY4 707 aaKnown RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 FBXL22Q6P050 247 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 DENND1BQ6P3S1 775 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 C22orf39Q6P5X5 142 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 LINGO4Q6UY18 593 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 KYAT3Q6YP21 454 aaKnown RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ZNF574Q6ZN55 896 aaPredicted RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 RBM44Q6ZP01 1051 aaKnown RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 Q6ZSR6 202 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 PARS2Q7L3T8 475 aaKnown RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 TMPRSS9Q7Z410 1059 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 PARGQ86W56 976 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 SFTPA2Q8IWL1 248 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 TRIM59Q8IWR1 403 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 LSMEM2Q8N112 164 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 GUF1Q8N442 669 aaKnown RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 TTC39CQ8N584 583 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 KYQ8NBH2 561 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 OR2A12Q8NGT7 310 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 LMX1AQ8TE12 382 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ERCC4Q92889 916 aaPredicted RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 SLC35C1Q96A29 364 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 FAM149B1Q96BN6 582 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 INTS4Q96HW7 963 aaKnown RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 FAXDC2Q96IV6 333 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 CCDC140Q96MF4 163 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 KLF6Q99612 283 aaPredicted RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 CCDC3Q9BQI4 270 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 FUCA2Q9BTY2 467 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 LRRC61Q9BV99 259 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 BOCQ9BWV1 1114 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 FOXP3Q9BZS1 431 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 CLPBQ9H078 707 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 GOLPH3LQ9H4A5 285 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ACP6Q9NPH0 428 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 COX16Q9P0S2 106 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ANKMY1Q9P2S6 941 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 APEX2Q9UBZ4 518 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 CGGBP1Q9UFW8 167 aaPredicted RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 VPS51Q9UID3 782 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 SLC25A13Q9UJS0 675 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 VANGL2Q9ULK5 521 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 COQ4Q9Y3A0 265 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 EMC9Q9Y3B6 208 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 PCDHB4Q9Y5E5 795 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ACTL7AQ9Y615 435 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ITPR2Q14571 2701 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 ICE1Q9Y2F5 2266 aa4.02□□□□□ -1.77
PTPRM-206ENST00000578093 SPTBN1Q01082 2364 aaKnown RBP4.02□□□□□ -1.77
PTPRM-206ENST00000578093 CELSR2Q9HCU4 2923 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 CSMD2Q7Z408 3487 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 A0A0D9SEW6 157 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 SPTY2D1-AS1A0A0U1RR47 76 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 A0A1W2PQM1 296 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 FAM170AA1A519 330 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 KCNU1A8MYU2 1149 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 D6RAR5 112 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 NTN3O00634 580 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-206ENST00000578093 ALOX15BO15296 676 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 AQP9O43315 295 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 SUV39H1O43463 412 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 ZNF821O75541 412 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-206ENST00000578093 GRAP2O75791 330 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 ENDOD1O94919 500 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 FBXO21O94952 628 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 ZNF205O95201 554 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 PCDH8O95206 1070 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 PAK4O96013 591 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-206ENST00000578093 APOEP02649 317 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 ITGA2BP08514 1039 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 PAEPP09466 180 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 GSTM1P09488 218 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 ZSCAN22P10073 491 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-206ENST00000578093 EPB41P11171 864 aaKnown RBP4.01□□□□□ -1.77
PTPRM-206ENST00000578093 ADRB3P13945 408 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 ZNF18P17022 549 aa4.01□□□□□ -1.77
PTPRM-206ENST00000578093 RPL10P27635 214 aaKnown RBP4.01□□□□□ -1.77
PTPRM-206ENST00000578093 RBMS1P29558 406 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms