RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RAD51BO15315 384 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 TPD52L2O43399 206 aaKnown RBP6.33□□□□□ -1.4
NUP88-212ENST00000576708 GFPT2O94808 682 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 PCDH8O95206 1070 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 CD160O95971 181 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 PAK4O96013 591 aaPredicted RBP6.33□□□□□ -1.4
NUP88-212ENST00000576708 F9P00740 461 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 THEGLP0DJG4 465 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 GIMD1P0DJR0 217 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 UCHL3P15374 230 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 CKMT2P17540 419 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 CHRNB2P17787 502 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 DGKAP23743 735 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 OR1E1P30953 314 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 SNX16P57768 344 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 BPIFB4P59827 614 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 NOMO3P69849 1222 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 GNA12Q03113 381 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 PLCL1Q15111 1095 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 CDO1Q16878 200 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 SETMARQ53H47 684 aaPredicted RBP6.33□□□□□ -1.4
NUP88-212ENST00000576708 FAM72AQ5TYM5 149 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 FAM72DQ6L9T8 149 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 GCNT7Q6ZNI0 430 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 ERN2Q76MJ5 926 aaKnown RBP6.33□□□□□ -1.4
NUP88-212ENST00000576708 TMC6Q7Z403 805 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 BNIPLQ7Z465 357 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 IQCHQ86VS3 1027 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 HORMAD1Q86X24 394 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 FAM72BQ86X60 149 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 ZDHHC17Q8IUH5 632 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 FAM114A1Q8IWE2 563 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 DCAF4L2Q8NA75 395 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 TMEM145Q8NBT3 493 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 JOSD2Q8TAC2 188 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 ENOX1Q8TC92 643 aaKnown RBP6.33□□□□□ -1.4
NUP88-212ENST00000576708 GPT2Q8TD30 523 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 RXFP2Q8WXD0 754 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 PGAP3Q96FM1 320 aaPredicted RBP6.33□□□□□ -1.4
NUP88-212ENST00000576708 SGSM3Q96HU1 749 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 C1orf74Q96LT6 269 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 PPP1R9BQ96SB3 815 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 PCDHB18PQ96TA0 734 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 STK33Q9BYT3 514 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 FOXP3Q9BZS1 431 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 TM6SF2Q9BZW4 377 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 ZYG11BQ9C0D3 744 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 VPS16Q9H269 839 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 GANQ9H2C0 597 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 PREBQ9HCU5 417 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 NLRC4Q9NPP4 1024 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 RRN3Q9NYV6 651 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 CHMP5Q9NZZ3 219 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 DKK4Q9UBT3 224 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 IL36AQ9UHA7 158 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 DNAI1Q9UI46 699 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 DMTF1Q9Y222 760 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 ITM2BQ9Y287 266 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 RAI2Q9Y5P3 530 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 COL5A1P20908 1838 aaPredicted RBP6.33□□□□□ -1.4
NUP88-212ENST00000576708 ZFYVE26Q68DK2 2539 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 ITPR1Q14643 2758 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 CABIN1Q9Y6J0 2220 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 A0A087WV48 116 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 ILVBLA1L0T0 632 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 ANKRD34BA5PLL1 514 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 POM121BA6NF01 834 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 CASC3O15234 703 aaKnown RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 YKT6O15498 198 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 SUSD5O60279 629 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 PIAS2O75928 621 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 NEBLO76041 1014 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 C1SP09871 688 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 FUT4P22083 530 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 ADRA1BP35368 520 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 EIF2S3P41091 472 aaKnown RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 SERPINH1P50454 418 aaKnown RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 CCNHP51946 323 aaPredicted RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 GP2P55259 537 aaKnown RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 FMO1Q01740 532 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 CCDC14Q49A88 953 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 CARD16Q5EG05 197 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 TCP11X2Q5H9J9 407 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 LRRC73Q5JTD7 316 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 TPRG1LQ5T0D9 272 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 RWDD4Q6NW29 188 aaKnown RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 Q6ZSR6 202 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 PARS2Q7L3T8 475 aaKnown RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 SETD3Q86TU7 594 aaPredicted RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 SLC22A18ASQ8N1D0 253 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 RYBPQ8N488 228 aaPredicted RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 OXR1Q8N573 874 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 CCDC185Q8N715 623 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 ZNF655Q8N720 491 aaPredicted RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 TMIEQ8NEW7 156 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 UBXN4Q92575 508 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 ARHGEF2Q92974 986 aaKnown RBP6.32□□□□□ -1.4
NUP88-212ENST00000576708 VOPP1Q96AW1 172 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 BMFQ96LC9 184 aa6.32□□□□□ -1.4
NUP88-212ENST00000576708 HAPLN3Q96S86 360 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms