RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PELI3Q8N2H9 469 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 PAF1Q8N7H5 531 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 TMEM35BQ8NCS4 154 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 NELFBQ8WX92 580 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 TBC1D31Q96DN5 1066 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 RNF31Q96EP0 1072 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 TRIT1Q9H3H1 467 aaKnown RBP16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 RETREG1Q9H6L5 497 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 APMAPQ9HDC9 416 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 CUEDC1Q9NWM3 386 aaPredicted RBP16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 LHX3Q9UBR4 397 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 APEX2Q9UBZ4 518 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 TLK1Q9UKI8 766 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 TRBV23OR9-2A0A075B6M9 112 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 TSPAN11A1L157 253 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 ELFN1P0C7U0 828 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 PNMA6AP0CW24 399 aaPredicted RBP16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 F8A1P23610 371 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 CLCN1P35523 988 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 SCNN1AP37088 669 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 GABRB2P47870 512 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 STX17P56962 302 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 ACOX1Q15067 660 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 CDO1Q16878 200 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 CRTC2Q53ET0 693 aaPredicted RBP16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 LIPIQ6XZB0 460 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 DNAAF5Q86Y56 855 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 CREBRFQ8IUR6 639 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 EMC1Q8N766 993 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 ZNF641Q96N77 438 aaPredicted RBP16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 PHF12Q96QT6 1004 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 ZPBPQ9BS86 351 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 GDPD2Q9HCC8 539 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 TMEM59LQ9UK28 342 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 RPS6KL1Q9Y6S9 549 aa16.28■□□□□ 0.2
CTDNEP1-211ENST00000575783 CHD5Q8TDI0 1954 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 CFAP69A5D8W1 941 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 FOXN3O00409 490 aaPredicted RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 RFPL1O75677 317 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 PDGFAP04085 211 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 CEACAM5P06731 702 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 PLEKP08567 350 aaPredicted RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 FURINP09958 794 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 STAT5AP42229 794 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 MARSP56192 900 aaKnown RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 CTBSQ01459 385 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 NRG1Q02297 640 aaPredicted RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 RAPGEF1Q13905 1077 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 GRM3Q14832 879 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 EIF2S3LQ2VIR3 472 aaKnown RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 MAMDC2Q7Z304 686 aaPredicted RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 SRRM1Q8IYB3 904 aaKnown RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 FMR1NBQ8N0W7 255 aaPredicted RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 PTCD2Q8WV60 388 aaKnown RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 NOL6Q9H6R4 1146 aaKnown RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 FBXO8Q9NRD0 319 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 TRNAU1APQ9NX07 287 aaKnown RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 SUFUQ9UMX1 484 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 NEU3Q9UQ49 428 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 CTNND2Q9UQB3 1225 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 TMEM184BQ9Y519 407 aaPredicted RBP16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 ST14Q9Y5Y6 855 aa16.27■□□□□ 0.2
CTDNEP1-211ENST00000575783 LRP4O75096 1905 aa16.27■□□□□ 0.19
CTDNEP1-211ENST00000575783 DOPEY1Q5JWR5 2465 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 BICDL2A1A5D9 508 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 POLR1CO15160 346 aaPredicted RBP16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 KATNA1O75449 491 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 DDAH2O95865 285 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 MYCLP1P12525 358 aaPredicted RBP16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 POU3F2P20265 443 aaPredicted RBP16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 TNFRSF8P28908 595 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 DLSTP36957 453 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 POLD2P49005 469 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 GPLD1P80108 840 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 RALGDSQ12967 914 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 C15orf59Q2T9L4 293 aaPredicted RBP16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 TMEM135Q86UB9 458 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 ESX1Q8N693 406 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 OR10G6Q8NH81 332 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 SNX21Q969T3 373 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 SLC38A3Q99624 504 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 PHPT1Q9NRX4 125 aaPredicted RBP16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 PDP2Q9P2J9 529 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 AJAP1Q9UKB5 411 aaPredicted RBP16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 POLHQ9Y253 713 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 PLEKHM1Q9Y4G2 1056 aa16.26■□□□□ 0.19
CTDNEP1-211ENST00000575783 CDC14CA4D256 554 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 PPP1R3GB7ZBB8 358 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 RASA4BC9J798 803 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 RASA4O43374 803 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 KRT38O76015 456 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 GM2AP17900 193 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 ADCY8P40145 1251 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 PPP1R2P41236 205 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 ACTR1BP42025 376 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 ACTR1AP61163 376 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 PEX6Q13608 980 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 GBP6Q6ZN66 633 aa16.25■□□□□ 0.19
CTDNEP1-211ENST00000575783 ARHGAP22Q7Z5H3 698 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms