RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 RGRP47804 291 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 CD97P48960 835 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 PTP4A2Q12974 167 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 MAN2A1Q16706 1144 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 VWA3BQ502W6 1294 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 CFAP58Q5T655 872 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 DCAF12Q5T6F0 453 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 DPPA4Q7L190 304 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 SRLQ86TD4 932 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 ZNF677Q86XU0 584 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 NAGSQ8N159 534 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 CBARPQ8N350 705 aaPredicted RBP9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 BMPERQ8N8U9 685 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 TSEN2Q8NCE0 465 aaKnown RBP9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 CCDC112Q8NEF3 446 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 SLC30A5Q8TAD4 765 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 PATE1Q8WXA2 126 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 MIB2Q96AX9 1013 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 MS4A3Q96HJ5 214 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 COQ10AQ96MF6 247 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 NSMCE3Q96MG7 304 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 DPYSL5Q9BPU6 564 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 TEX101Q9BY14 249 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 GSDMCQ9BYG8 508 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 STK33Q9BYT3 514 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 WDR26Q9H7D7 661 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 ATP13A3Q9H7F0 1226 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 CARS2Q9HA77 564 aaKnown RBP9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 TMEM9Q9P0T7 183 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 MOSPD1Q9UJG1 213 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 NOCTQ9UK39 431 aaKnown RBP9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 PLAAQ9Y263 795 aa9.98□□□□□ -0.81
CALCOCO2-227ENST00000575560 ITPR2Q14571 2701 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 LOC101059948A0A1B0GTJ6 334 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 BLACEA4D250 179 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 F8VZ95 297 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 TRAFD1O14545 582 aaPredicted RBP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 TEX33O43247 280 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 DUX1O43812 170 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 PRAMEF11O60813 436 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 KRT3P12035 628 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 CHRNB2P17787 502 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 MPSTP25325 297 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 AK4P27144 223 aaPredicted RBP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 MAP4P27816 1152 aaKnown RBP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 SERPINA4P29622 427 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 CSF2RBP32927 897 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 NDST2P52849 883 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 GSCP56915 257 aaPredicted RBP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 RAB15P59190 212 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 POLR2LP62875 67 aaKnown RBP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 NSUN2Q08J23 767 aaKnown RBP eCLIP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 ILF3Q12906 894 aaKnown RBP eCLIP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 CRTC2Q53ET0 693 aaPredicted RBP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 ANKS6Q68DC2 871 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 TMEM71Q6P5X7 295 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 WDR59Q6PJI9 974 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 SLC20A1Q8WUM9 679 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 PTCD2Q8WV60 388 aaKnown RBP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 APOBEC4Q8WW27 367 aaKnown RBP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 RTP4Q96DX8 246 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 TUBGCP2Q9BSJ2 902 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 FRMD8Q9BZ67 464 aaPredicted RBP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 CATSPERBQ9H7T0 1116 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 GPN2Q9H9Y4 310 aaPredicted RBP9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 KIAA1468Q9P260 1216 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 FZD10Q9ULW2 581 aa9.97□□□□□ -0.81
CALCOCO2-227ENST00000575560 ANKRD36A6QL64 1941 aa9.96□□□□□ -0.81
CALCOCO2-227ENST00000575560 CELSR2Q9HCU4 2923 aa9.96□□□□□ -0.81
CALCOCO2-227ENST00000575560 EFCAB7A8K855 629 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 A8MX80 341 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 CREB3O43889 395 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 GADD45BO75293 160 aaPredicted RBP9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 PRKAR1AP10644 381 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 UNGP13051 313 aaPredicted RBP9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 GPD1P21695 349 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 OAS2P29728 719 aaKnown RBP9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 ADCY8P40145 1251 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 PAPOLAP51003 745 aaKnown RBP9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 AIF1P55008 147 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 GPLD1P80108 840 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 CTBSQ01459 385 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 MC2RQ01718 297 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 FMO1Q01740 532 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 CDR2Q01850 454 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 BCL2L1Q07817 233 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 ABHD18Q0P651 414 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 CDC20Q12834 499 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 ACOX1Q15067 660 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 SLC30A9Q6PML9 568 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 TIPARPQ7Z3E1 657 aaKnown RBP9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 ARHGAP22Q7Z5H3 698 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 FAM129CQ86XR2 697 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 NLGN4XQ8N0W4 816 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 NLGN4YQ8NFZ3 816 aaPredicted RBP9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 SCARF2Q96GP6 870 aaPredicted RBP9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 TEFMQ96QE5 360 aaKnown RBP9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 C11orf70Q9BRQ4 267 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 EFHD1Q9BUP0 239 aa9.96□□□□□ -0.82
CALCOCO2-227ENST00000575560 LRRC4CQ9HCJ2 640 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms