RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 LRP4O75096 1905 aa10.66□□□□□ -0.7
LITAF-216ENST00000574848 CFAP47Q6ZTR5 3102 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 ESYT3A0FGR9 886 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 GOLGA6L10A6NI86 522 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 TRIM38O00635 465 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 NEMP1O14524 444 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 DAPK3O43293 454 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 SDC3O75056 442 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 PIGNO95427 931 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 PEX11BO96011 259 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 CSF2P04141 144 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 TIMP2P16035 220 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 CKMT2P17540 419 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 OAS2P29728 719 aaKnown RBP10.65□□□□□ -0.7
LITAF-216ENST00000574848 IGFALSP35858 605 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 HSPA9P38646 679 aaKnown RBP10.65□□□□□ -0.7
LITAF-216ENST00000574848 MMP12P39900 470 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 ARL4AP40617 200 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 PTGIRP43119 386 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 RGRP47804 291 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 AP1S1P61966 158 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 HNRNPKP61978 463 aaKnown RBP eCLIP10.65□□□□□ -0.76e-8■□□□□ 11.1
LITAF-216ENST00000574848 YPEL5P62699 121 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 MRPS25P82663 173 aaKnown RBP10.65□□□□□ -0.7
LITAF-216ENST00000574848 CBX1P83916 185 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 GABPB1Q06547 395 aaPredicted RBP10.65□□□□□ -0.7
LITAF-216ENST00000574848 NSUN2Q08J23 767 aaKnown RBP eCLIP10.65□□□□□ -0.7
LITAF-216ENST00000574848 DNAJC3Q13217 504 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 SGCGQ13326 291 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 KLF1Q13351 362 aaPredicted RBP10.65□□□□□ -0.7
LITAF-216ENST00000574848 SIX1Q15475 284 aaPredicted RBP10.65□□□□□ -0.7
LITAF-216ENST00000574848 UGP2Q16851 508 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 SMTNL2Q2TAL5 461 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 TMCO4Q5TGY1 634 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 DUPD1Q68J44 220 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 DRICH1Q6PGQ1 229 aaPredicted RBP10.65□□□□□ -0.7
LITAF-216ENST00000574848 DHRS13Q6UX07 377 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 TTC7BQ86TV6 843 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 ZSWIM9Q86XI8 627 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 VSIG1Q86XK7 387 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 CPNE8Q86YQ8 564 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 CACTIN-AS1Q8N1I8 211 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 FAM181AQ8N9Y4 354 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 TP53I13Q8NBR0 393 aaPredicted RBP10.65□□□□□ -0.7
LITAF-216ENST00000574848 NETO2Q8NC67 525 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 TSEN2Q8NCE0 465 aaKnown RBP10.65□□□□□ -0.7
LITAF-216ENST00000574848 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
LITAF-216ENST00000574848 CSPG4P5Q96PW8 444 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 TRIM51Q9BSJ1 452 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 C1QTNF7Q9BXJ2 289 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 DPH5Q9H2P9 285 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 SUV39H2Q9H5I1 410 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 ATP13A3Q9H7F0 1226 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 SP110Q9HB58 689 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 PCDH18Q9HCL0 1135 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.65□□□□□ -0.7
LITAF-216ENST00000574848 UCKL1Q9NWZ5 548 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 NLGN3Q9NZ94 848 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 WHRNQ9P202 907 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 IPO11Q9UI26 975 aaKnown RBP10.65□□□□□ -0.7
LITAF-216ENST00000574848 CSNK1G3Q9Y6M4 447 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 PKD1L2Q7Z442 2459 aa10.65□□□□□ -0.7
LITAF-216ENST00000574848 COL27A1Q8IZC6 1860 aaPredicted RBP10.64□□□□□ -0.71
LITAF-216ENST00000574848 hCG_1818297A0A087WSY0 165 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 CFAP69A5D8W1 941 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 GOLGA8CPA6NN73 597 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 SRRM3A6NNA2 597 aaPredicted RBP10.64□□□□□ -0.71
LITAF-216ENST00000574848 GOLGA8KD6RF30 607 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 H3BM21 787 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 DFFAO00273 331 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 TRAFD1O14545 582 aaPredicted RBP10.64□□□□□ -0.71
LITAF-216ENST00000574848 SCAMP1O15126 338 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 MUSKO15146 869 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 SIGLEC6O43699 453 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 TM7SF2O76062 418 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 CR2P20023 1033 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 SERPINA4P29622 427 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 SERPINB6P35237 376 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 ARSEP51690 589 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 PTK6Q13882 451 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 PDE1CQ14123 709 aaPredicted RBP10.64□□□□□ -0.71
LITAF-216ENST00000574848 TFDP2Q14188 446 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 SLMAPQ14BN4 828 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 PDK2Q15119 407 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 LRRC73Q5JTD7 316 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 TPRG1LQ5T0D9 272 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 TXNRD3NBQ6F5E7 133 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 LRIG3Q6UXM1 1119 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 ARHGAP36Q6ZRI8 547 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 GSTA5Q7RTV2 222 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 CROCCP2Q86T23 111 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 SRLQ86TD4 932 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 KCTD6Q8NC69 237 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 ZNF548Q8NEK5 533 aaPredicted RBP10.64□□□□□ -0.71
LITAF-216ENST00000574848 CXorf40AQ8TE69 158 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 CINPQ9BW66 212 aaPredicted RBP10.64□□□□□ -0.71
LITAF-216ENST00000574848 MAK16Q9BXY0 300 aaKnown RBP10.64□□□□□ -0.71
LITAF-216ENST00000574848 USP29Q9HBJ7 922 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 PCDH12Q9NPG4 1184 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 ETNK2Q9NVF9 386 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms