RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 NT5MQ9NPB1 228 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 TMLHEQ9NVH6 421 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 NUDT5Q9UKK9 219 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 CRYL1Q9Y2S2 319 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 NDUFAF1Q9Y375 327 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 PTGDR2Q9Y5Y4 395 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 RNF103-CHMP3A0A140T963 221 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 AQP12BA6NM10 295 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 C9JVG2 144 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 E9PAM4 449 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 PPP6CO00743 305 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 ANGPT2O15123 496 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 S1PR4O95977 384 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 CD86P42081 329 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 TMED1Q13445 227 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 INTS11Q5TA45 600 aaKnown RBP15.65■□□□□ 0.1
NUP88-207ENST00000573584 AQP12AQ8IXF9 295 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 SLC15A3Q8IY34 581 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 MFSD2AQ8NA29 543 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 CASP10Q92851 521 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 PTERQ96BW5 349 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 BIRC8Q96P09 236 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 DSEQ9UL01 958 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 PLXNB2O15031 1838 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 MYLKQ15746 1914 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 ZNF236Q9UL36 1845 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 DLGAP1O14490 977 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 SLC4A1P02730 911 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 PSMA4P25789 261 aaKnown RBP15.65■□□□□ 0.1
NUP88-207ENST00000573584 SLC26A3P40879 764 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 ARSDP51689 593 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 ATP6V0D1P61421 351 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 CAPRIN1Q14444 709 aaKnown RBP15.65■□□□□ 0.1
NUP88-207ENST00000573584 KCTD21Q4G0X4 260 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 PAN2Q504Q3 1202 aaKnown RBP15.65■□□□□ 0.1
NUP88-207ENST00000573584 ARTNQ5T4W7 220 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 AFMIDQ63HM1 303 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 PRMT9Q6P2P2 845 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 FAM171BQ6P995 826 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 C14orf80Q86SX3 495 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 TLK2Q86UE8 772 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 CLVS1Q8IUQ0 354 aaPredicted RBP15.65■□□□□ 0.1
NUP88-207ENST00000573584 MIER2Q8N344 545 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 IMP4Q96G21 291 aaKnown RBP15.65■□□□□ 0.1
NUP88-207ENST00000573584 ATP13A1Q9HD20 1204 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 MID1IP1Q9NPA3 183 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 RGS18Q9NS28 235 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 ABCC13Q9NSE7 274 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 FAM105AQ9NUU6 356 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 ABCD2Q9UBJ2 740 aa15.65■□□□□ 0.1
NUP88-207ENST00000573584 RGS17Q9UGC6 210 aaPredicted RBP15.65■□□□□ 0.1
NUP88-207ENST00000573584 OR51F1A6NGY5 319 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 SLC7A4O43246 635 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 CDK14O94921 469 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 PAPSS2O95340 614 aaPredicted RBP15.64■□□□□ 0.09
NUP88-207ENST00000573584 SIX3O95343 332 aaPredicted RBP15.64■□□□□ 0.09
NUP88-207ENST00000573584 CAPN3P20807 821 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 FASP25445 335 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 PGFP49763 221 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 SCNN1GP51170 649 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 RENBPP51606 427 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 GRB7Q14451 532 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 EPHX4Q8IUS5 362 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 LRRC49Q8IUZ0 686 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 MINDY1Q8N5J2 469 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 PTGR2Q8N8N7 351 aaPredicted RBP15.64■□□□□ 0.09
NUP88-207ENST00000573584 ABTB1Q969K4 478 aaPredicted RBP15.64■□□□□ 0.09
NUP88-207ENST00000573584 ACBD6Q9BR61 282 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 ADI1Q9BV57 179 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 VPS45Q9NRW7 570 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 AGPAT4Q9NRZ5 378 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 TUBA8Q9NY65 449 aaPredicted RBP15.64■□□□□ 0.09
NUP88-207ENST00000573584 MARCH4Q9P2E8 410 aaPredicted RBP15.64■□□□□ 0.09
NUP88-207ENST00000573584 ARL5CA6NH57 179 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 PIP5K1BO14986 540 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 SEC24DO94855 1032 aaPredicted RBP15.64■□□□□ 0.09
NUP88-207ENST00000573584 WISP3O95389 354 aaPredicted RBP15.64■□□□□ 0.09
NUP88-207ENST00000573584 MYL3P08590 195 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 NFKB2Q00653 900 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 MERTKQ12866 999 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 BEND5Q7L4P6 421 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 GALNT7Q86SF2 657 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 DDIASQ8IXT1 998 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 SCML4Q8N228 414 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 MFSD1Q9H3U5 465 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 DNAAF2Q9NVR5 837 aaKnown RBP15.64■□□□□ 0.09
NUP88-207ENST00000573584 HS3ST4Q9Y661 456 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 C17orf102A2RUQ5 167 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 MYF6P23409 242 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 STT3AP46977 705 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 FOXA1P55317 472 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 NUP107P57740 925 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 ZBED5Q49AG3 693 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 TWIST2Q8WVJ9 160 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 KLHL5Q96PQ7 755 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 CMTM6Q9NX76 183 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 EBF1Q9UH73 591 aa15.64■□□□□ 0.09
NUP88-207ENST00000573584 PTBP2Q9UKA9 531 aaKnown RBP15.64■□□□□ 0.09
NUP88-207ENST00000573584 FAF1Q9UNN5 650 aaPredicted RBP15.64■□□□□ 0.09
NUP88-207ENST00000573584 TTC24A2A3L6 582 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms