RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 LIPIQ6XZB0 460 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 KDELC2Q7Z4H8 507 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 PHLDB2Q86SQ0 1253 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 ZSWIM9Q86XI8 627 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 ELOA2Q8IYF1 753 aaPredicted RBP12.29□□□□□ -0.44
SMIM28-201ENST00000573100 PAF1Q8N7H5 531 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 RTL3Q8N8U3 475 aaKnown RBP12.29□□□□□ -0.44
SMIM28-201ENST00000573100 PATE1Q8WXA2 126 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 RXFP2Q8WXD0 754 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 CPA5Q8WXQ8 436 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 RTP4Q96DX8 246 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 TUBGCP5Q96RT8 1024 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 SIX2Q9NPC8 291 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 PRDM8Q9NQV8 689 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 KCNK4Q9NYG8 393 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 UBA2Q9UBT2 640 aaPredicted RBP12.29□□□□□ -0.44
SMIM28-201ENST00000573100 NEU3Q9UQ49 428 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 TP53TG5Q9Y2B4 290 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 CELSR2Q9HCU4 2923 aa12.29□□□□□ -0.44
SMIM28-201ENST00000573100 BIN1O00499 593 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 VPS4BO75351 444 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 LSM8O95777 96 aaKnown RBP12.28□□□□□ -0.44
SMIM28-201ENST00000573100 FUCA1P04066 466 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 CEACAM5P06731 702 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 MYCLP1P12525 358 aaPredicted RBP12.28□□□□□ -0.44
SMIM28-201ENST00000573100 AK4P27144 223 aaPredicted RBP12.28□□□□□ -0.44
SMIM28-201ENST00000573100 EPHB2P29323 1055 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 CSF2RBP32927 897 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 MAN1A1P33908 653 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 GNPDA1P46926 289 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 PPM1FP49593 454 aaPredicted RBP12.28□□□□□ -0.44
SMIM28-201ENST00000573100 COPB1P53618 953 aaKnown RBP12.28□□□□□ -0.44
SMIM28-201ENST00000573100 POLR2LP62875 67 aaKnown RBP12.28□□□□□ -0.44
SMIM28-201ENST00000573100 MC2RQ01718 297 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 ABHD18Q0P651 414 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 RALGDSQ12967 914 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 ACOX1Q15067 660 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 PARP15Q460N3 678 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 CRTC2Q53ET0 693 aaPredicted RBP12.28□□□□□ -0.44
SMIM28-201ENST00000573100 CEACAM20Q6UY09 585 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 TIPARPQ7Z3E1 657 aaKnown RBP12.28□□□□□ -0.44
SMIM28-201ENST00000573100 NAGSQ8N159 534 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 CCDC185Q8N715 623 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 BMPERQ8N8U9 685 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 STARD8Q92502 1023 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 CTRCQ99895 268 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 ZPBPQ9BS86 351 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 TRIT1Q9H3H1 467 aaKnown RBP12.28□□□□□ -0.44
SMIM28-201ENST00000573100 ATP13A3Q9H7F0 1226 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 METTL5Q9NRN9 209 aaKnown RBP12.28□□□□□ -0.44
SMIM28-201ENST00000573100 PHPT1Q9NRX4 125 aaPredicted RBP12.28□□□□□ -0.44
SMIM28-201ENST00000573100 TMEM9Q9P0T7 183 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 PDP2Q9P2J9 529 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 VPS4AQ9UN37 437 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 KCTD3Q9Y597 815 aa12.28□□□□□ -0.44
SMIM28-201ENST00000573100 A8MU76 341 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 A8MX80 341 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 MKRN2OSH3BPM6 223 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 K7EM74 188 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 NR1D1P20393 614 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 SERPINA4P29622 427 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 NOP2P46087 812 aaKnown RBP12.27□□□□□ -0.45
SMIM28-201ENST00000573100 GPLD1P80108 840 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 CTBSQ01459 385 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 ATP1A1-AS1Q5TC04 95 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 NAA35Q5VZE5 725 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 CRYBG3Q68DQ2 2970 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 TCTN3Q6NUS6 607 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 ASB18Q6ZVZ8 466 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 STRADAQ7RTN6 431 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 SRLQ86TD4 932 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 CCDC13Q8IYE1 715 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 PELI3Q8N2H9 469 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 EFCAB3Q8N7B9 438 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 GPT2Q8TD30 523 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 CENPIQ92674 756 aaPredicted RBP12.27□□□□□ -0.45
SMIM28-201ENST00000573100 AHCYL2Q96HN2 611 aaKnown RBP12.27□□□□□ -0.45
SMIM28-201ENST00000573100 ZMYND15Q9H091 742 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 FBXO8Q9NRD0 319 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 SUFUQ9UMX1 484 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 PCDHB3Q9Y5E6 796 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 KCNMB2Q9Y691 235 aa12.27□□□□□ -0.45
SMIM28-201ENST00000573100 SPENQ96T58 3664 aaKnown RBP12.27□□□□□ -0.45
SMIM28-201ENST00000573100 ESPL1Q14674 2120 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 C2CD4BA6NLJ0 364 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 TTLL8A6PVC2 850 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 STK17BO94768 372 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 GM2AP17900 193 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 GNLYP22749 145 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 ERCC5P28715 1186 aaPredicted RBP12.26□□□□□ -0.45
SMIM28-201ENST00000573100 PTPN9P43378 593 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 UQCRFS1P47985 274 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 CSNK1DP48730 415 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 HDAC4P56524 1084 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 BCL2L1Q07817 233 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 SNAP47Q5SQN1 464 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 CAPRIN2Q6IMN6 1127 aaKnown RBP12.26□□□□□ -0.45
SMIM28-201ENST00000573100 DPPA4Q7L190 304 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 SLFN11Q7Z7L1 901 aa12.26□□□□□ -0.45
SMIM28-201ENST00000573100 HEATR4Q86WZ0 1026 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms