RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 MFSD11O43934 449 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 SOD1P00441 154 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 CTPS1P17812 591 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 CASP14P31944 242 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 VIPR1P32241 457 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 MMP13P45452 471 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 POLD2P49005 469 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 SLC10A2Q12908 348 aaPredicted RBP18.12■□□□□ 0.49
CHD3-214ENST00000572579 NFKBIBQ15653 356 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 KIF26BQ2KJY2 2108 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 MARC1Q5VT66 337 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 DENND2CQ68D51 928 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 NCBP2-AS2Q69YL0 99 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 ATPAF2Q8N5M1 289 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 PQLC3Q8N755 202 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 FAM46DQ8NEK8 389 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 GRAMD1AQ96CP6 724 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 DTD2Q96FN9 168 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 UBL7Q96S82 380 aaPredicted RBP18.12■□□□□ 0.49
CHD3-214ENST00000572579 LGMNQ99538 433 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 TEX101Q9BY14 249 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 CYP4F12Q9HCS2 524 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 NT5MQ9NPB1 228 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 PHTF1Q9UMS5 762 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 LUC7L2Q9Y383 392 aaKnown RBP18.12■□□□□ 0.49
CHD3-214ENST00000572579 RNF215Q9Y6U7 377 aa18.12■□□□□ 0.49
CHD3-214ENST00000572579 MYO1FO00160 1098 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 CPP00450 1065 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 PRLP01236 227 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 RPLP0P05388 317 aaKnown RBP18.11■□□□□ 0.49
CHD3-214ENST00000572579 HNRNPH3P31942 346 aaKnown RBP18.11■□□□□ 0.49
CHD3-214ENST00000572579 HSPA9P38646 679 aaKnown RBP18.11■□□□□ 0.49
CHD3-214ENST00000572579 CXADRP78310 365 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 PTSQ03393 145 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 GALNT2Q10471 571 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 SPIDRQ14159 915 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 HLTFQ14527 1009 aaKnown RBP eCLIP18.11■□□□□ 0.49
CHD3-214ENST00000572579 PAFAH1B3Q15102 231 aaKnown RBP18.11■□□□□ 0.49
CHD3-214ENST00000572579 CERCAMQ5T4B2 595 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 TAF8Q7Z7C8 310 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 HEATR4Q86WZ0 1026 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 Q8N9G6 341 aaPredicted RBP18.11■□□□□ 0.49
CHD3-214ENST00000572579 GPBAR1Q8TDU6 330 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 SCG3Q8WXD2 468 aaKnown RBP18.11■□□□□ 0.49
CHD3-214ENST00000572579 MAML1Q92585 1016 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 NUS1Q96E22 293 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 SCRN2Q96FV2 425 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 FRMD8Q9BZ67 464 aaPredicted RBP18.11■□□□□ 0.49
CHD3-214ENST00000572579 LRRN3Q9H3W5 708 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 WDR26Q9H7D7 661 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 APPL1Q9UKG1 709 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 ATXN7L1Q9ULK2 861 aaPredicted RBP18.11■□□□□ 0.49
CHD3-214ENST00000572579 CFAP46Q8IYW2 2715 aa18.11■□□□□ 0.49
CHD3-214ENST00000572579 PRSS38A1L453 326 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 ATXN7O15265 892 aaPredicted RBP18.1■□□□□ 0.49
CHD3-214ENST00000572579 EFSO43281 561 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 TNFSF15O95150 251 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 FGF1P05230 155 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 HGFP14210 728 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 GARSP41250 739 aaKnown RBP18.1■□□□□ 0.49
CHD3-214ENST00000572579 NIPAL4Q0D2K0 466 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 KRT81Q14533 505 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 ANKRD20A8PQ5CZ79 823 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 FOXR1Q6PIV2 292 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 GPR155Q7Z3F1 870 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 C17orf82Q86X59 251 aaPredicted RBP18.1■□□□□ 0.49
CHD3-214ENST00000572579 ATL2Q8NHH9 583 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 WDR36Q8NI36 951 aaKnown RBP18.1■□□□□ 0.49
CHD3-214ENST00000572579 ARRDC2Q8TBH0 407 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 ZNF564Q8TBZ8 553 aaPredicted RBP18.1■□□□□ 0.49
CHD3-214ENST00000572579 FAF2Q96CS3 445 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 AGAP2Q99490 1192 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 SEMA3CQ99985 751 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 XPO4Q9C0E2 1151 aaKnown RBP18.1■□□□□ 0.49
CHD3-214ENST00000572579 SYNDIG1Q9H7V2 258 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 THSD1Q9NS62 852 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 RCOR3Q9P2K3 495 aaPredicted RBP18.1■□□□□ 0.49
CHD3-214ENST00000572579 PLEKHM1Q9Y4G2 1056 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 LRP4O75096 1905 aa18.1■□□□□ 0.49
CHD3-214ENST00000572579 D6RAR5 112 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 KLK10O43240 276 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 B4GAT1O43505 415 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 PROSCO94903 275 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 MYCLP1P12525 358 aaPredicted RBP18.09■□□□□ 0.49
CHD3-214ENST00000572579 AK4P27144 223 aaPredicted RBP18.09■□□□□ 0.49
CHD3-214ENST00000572579 CDK3Q00526 305 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 B4GALNT1Q00973 533 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 DSC2Q02487 901 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 GBE1Q04446 702 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 ZFP36L1Q07352 338 aaKnown RBP18.09■□□□□ 0.49
CHD3-214ENST00000572579 RALGPS1Q5JS13 557 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 ARMC12Q5T9G4 340 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 SPECC1LQ69YQ0 1117 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 ALG1LQ6GMV1 187 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 CLEC14AQ86T13 490 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.09■□□□□ 0.49
CHD3-214ENST00000572579 PAF1Q8N7H5 531 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 WDR48Q8TAF3 677 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 KCNE4Q8WWG9 221 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 SLC39A7Q92504 469 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms