RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 TRIM31Q9BZY9 425 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 DPH5Q9H2P9 285 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 EPB41L5Q9HCM4 733 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 NT5MQ9NPB1 228 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 SUN2Q9UH99 717 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 SLCO3A1Q9UIG8 710 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 FCF1Q9Y324 198 aaKnown RBP13.84□□□□□ -0.19
RPAIN-209ENST00000571558 SNX24Q9Y343 169 aa13.84□□□□□ -0.19
RPAIN-209ENST00000571558 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-209ENST00000571558 DNALI1O14645 258 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 ATP9BO43861 1147 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 SEC31AO94979 1220 aaKnown RBP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 IGHV4-34P06331 123 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 ATP5BP06576 529 aaKnown RBP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 SRPRAP08240 638 aaKnown RBP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 MMP2P08253 660 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 ADCY8P40145 1251 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 RPS14P62263 151 aaKnown RBP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 NSUN2Q08J23 767 aaKnown RBP eCLIP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 NIPAL4Q0D2K0 466 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 ZNF235Q14590 738 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 KCNJ11Q14654 390 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 FNDC3BQ53EP0 1204 aaKnown RBP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 RNASEH2BQ5TBB1 312 aaKnown RBP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 KIAA0895LQ68EN5 471 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 ITPRIPL1Q6GPH6 555 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 ZDHHC24Q6UX98 284 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 OXR1Q8N573 874 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 TAB3Q8N5C8 712 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 ATP11CQ8NB49 1132 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 KDM1BQ8NB78 822 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 FRS2Q8WU20 508 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 CYB5D2Q8WUJ1 264 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 CPT1BQ92523 772 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 VOPP1Q96AW1 172 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 IMP4Q96G21 291 aaKnown RBP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 SNF8Q96H20 258 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 OXNAD1Q96HP4 312 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 NSMCE3Q96MG7 304 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 FCRL5Q96RD9 977 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 CINPQ9BW66 212 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-209ENST00000571558 CEP44Q9C0F1 390 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 SLC25A51Q9H1U9 297 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 ERVMER34-1Q9H9K5 563 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 ETNK1Q9HBU6 452 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 PRSS16Q9NQE7 514 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 RAB6BQ9NRW1 208 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 WHRNQ9P202 907 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 RSPH14Q9UHP6 348 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 SLC25A13Q9UJS0 675 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 SPTA1P02549 2419 aa13.83□□□□□ -0.2
RPAIN-209ENST00000571558 ITIH2P19823 946 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 ECHS1P30084 290 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 FDFT1P37268 417 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 HSPA9P38646 679 aaKnown RBP13.82□□□□□ -0.2
RPAIN-209ENST00000571558 MAXP61244 160 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 IL9RQ01113 521 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 TBC1D25Q3MII6 688 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 FAXCQ5TGI0 409 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 ZNF776Q68DI1 518 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-209ENST00000571558 KCTD11Q693B1 232 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 HIBCHQ6NVY1 386 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-209ENST00000571558 C22orf39Q6P5X5 142 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 PCSK4Q6UW60 755 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
RPAIN-209ENST00000571558 GATAD2AQ86YP4 633 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 SPACA3Q8IXA5 215 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 BBS5Q8N3I7 341 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 NAT8LQ8N9F0 302 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 ZNF248Q8NDW4 579 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 SPATA22Q8NHS9 363 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 LRRC45Q96CN5 670 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 MLPHQ9BV36 600 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-209ENST00000571558 POLR1EQ9GZS1 481 aaKnown RBP13.82□□□□□ -0.2
RPAIN-209ENST00000571558 CLMPQ9H6B4 373 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 ZDHHC18Q9NUE0 388 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 HECTD1Q9ULT8 2610 aa13.82□□□□□ -0.2
RPAIN-209ENST00000571558 TCRBV7S3A2A0A539 114 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 TTC24A2A3L6 582 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 LRRC72A6NJI9 287 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 F5H423 210 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 BRINP1O60477 761 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 CKMT2P17540 419 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 CD38P28907 300 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 TNFRSF8P28908 595 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 RXRGP48443 463 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 CSNK1DP48730 415 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 CARSP49589 748 aaKnown RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 RHOAP61586 193 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 CXADRP78310 365 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 SKOR1P84550 965 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 E2F1Q01094 437 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 DSC2Q02487 901 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 DNAJC3Q13217 504 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 DLG2Q15700 870 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 TAF1BQ53T94 588 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 ANKRD22Q5VYY1 191 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 IZUMO3Q5VZ72 239 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 WDR93Q6P2C0 686 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 LAYNQ6UX15 382 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms