RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 GARSP41250 739 aaKnown RBP12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 ABCG1P45844 678 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 GALNT2Q10471 571 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 TRAF2Q12933 501 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 PDK2Q15119 407 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 CNGA3Q16281 694 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 ARMC12Q5T9G4 340 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 NCBP2-AS2Q69YL0 99 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 TIGD7Q6NT04 549 aaPredicted RBP12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 LVRNQ6Q4G3 990 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 CRTC1Q6UUV9 634 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 LRRC69Q6ZNQ3 347 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 USP45Q70EL2 814 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 PDZD3Q86UT5 571 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 GKN2Q86XP6 184 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 MAP7D3Q8IWC1 876 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 SDR16C5Q8N3Y7 309 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 KYQ8NBH2 561 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 OR56A4Q8NGH8 313 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 SNIP1Q8TAD8 396 aaKnown RBP12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 WDR48Q8TAF3 677 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 FAM71BQ8TC56 605 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 FUBP1Q96AE4 644 aaKnown RBP12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 NSMCE3Q96MG7 304 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 PACSIN1Q9BY11 444 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 POLR1EQ9GZS1 481 aaKnown RBP12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 TSPY26PQ9H489 355 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 SYNDIG1Q9H7V2 258 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 NT5MQ9NPB1 228 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 KCTD5Q9NXV2 234 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 SIRPGQ9P1W8 387 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 GULP1Q9UBP9 304 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 PHTF1Q9UMS5 762 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 GPR34Q9UPC5 381 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 TTLL3Q9Y4R7 772 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 LOC400499M0QZD8 3231 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 TLX3O43711 291 aaPredicted RBP12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 HEXIM1O94992 359 aaKnown RBP12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 PGLSO95336 258 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 TNFP01375 233 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 MPOP05164 745 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 FECHP22830 423 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 MAN1A1P33908 653 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 ARSEP51690 589 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 GABREP78334 506 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 ITKQ08881 620 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 ARHGEF7Q14155 803 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 PAFAH1B3Q15102 231 aaKnown RBP12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 ISXQ2M1V0 245 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 TBC1D25Q3MII6 688 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 ANKRD20A8PQ5CZ79 823 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 PERM1Q5SV97 790 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 LCE2AQ5TA79 106 aaPredicted RBP12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 DENND2CQ68D51 928 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 RBM44Q6ZP01 1051 aaKnown RBP12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 CPNE8Q86YQ8 564 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 LSMEM2Q8N112 164 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 OR1E3Q8WZA6 343 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 FGF11Q92914 225 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 COQ10AQ96MF6 247 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 RBM15Q96T37 977 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 SEMA3CQ99985 751 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 CCDC3Q9BQI4 270 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 FGF22Q9HCT0 170 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 PADI4Q9UM07 663 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 RAI2Q9Y5P3 530 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 DGKBQ9Y6T7 804 aa12.38□□□□□ -0.43
CTDNEP1-205ENST00000570828 URB1O60287 2271 aaKnown RBP12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 GOLGA6CA6NDK9 693 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 GOLGA6BA6NDN3 693 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 TMEM202A6NGA9 273 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 NPIPB15A6NHN6 443 aaPredicted RBP12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 PSMD11O00231 422 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 PDE2AO00408 941 aaPredicted RBP12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 TNFRSF10CO14798 259 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 MFAP3LO75121 409 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 TCEA3O75764 348 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 MAP3K6O95382 1288 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 S1PR4O95977 384 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 HOXC4P09017 264 aaPredicted RBP12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 TMEM253P0C7T8 217 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 GOLGA6DP0CG33 693 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 MYCLP1P12525 358 aaPredicted RBP12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 GM2AP17900 193 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 MX2P20592 715 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 TRIM23P36406 574 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 EIF2S3P41091 472 aaKnown RBP12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 TAS2R40P59535 323 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 SPIDRQ14159 915 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 IFI16Q16666 785 aaKnown RBP12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 ATP13A4Q4VNC1 1196 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 PNCKQ6P2M8 343 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 VSTM4Q8IW00 320 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 NDUFAF2Q8N183 169 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 TEX26Q8N6G2 289 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 RNF214Q8ND24 703 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 GRAMD1AQ96CP6 724 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 DTD2Q96FN9 168 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 CCDC42Q96M95 316 aa12.37□□□□□ -0.43
CTDNEP1-205ENST00000570828 ZNF830Q96NB3 372 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms