RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 POLR2LP62875 67 aaKnown RBP8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 CYP4F2P78329 520 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 NFKB2Q00653 900 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 IL10RBQ08334 325 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 NFATC3Q12968 1075 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 EIF3IQ13347 325 aaKnown RBP8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 HLTFQ14527 1009 aaKnown RBP eCLIP8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZNF235Q14590 738 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 CNGA3Q16281 694 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 ASIC2Q16515 512 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 MAP9Q49MG5 647 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 TMCO4Q5TGY1 634 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 NKAIN2Q5VXU1 208 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 OGFOD3Q6PK18 319 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 SLC30A9Q6PML9 568 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 RFLNAQ6ZTI6 216 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 PRICKLE2Q7Z3G6 844 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZNF571Q7Z3V5 609 aaPredicted RBP8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 HSD11B1LQ7Z5J1 315 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 HEATR4Q86WZ0 1026 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 PGBD5Q8N414 524 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 EXD3Q8N9H8 876 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 RCBTB1Q8NDN9 531 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 OR6C4Q8NGE1 309 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 PATE1Q8WXA2 126 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 HSPH1Q92598 858 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 EXTL1Q92935 676 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZNF653Q96CK0 615 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 NUS1Q96E22 293 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 SMIM14Q96QK8 99 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 PSKH2Q96QS6 385 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 TRIM4Q9C037 500 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 HAUS4Q9H6D7 363 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZWILCHQ9H900 591 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 NOD2Q9HC29 1040 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 ETNK2Q9NVF9 386 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 SEPT3Q9UH03 358 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 APPL1Q9UKG1 709 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 PLEKHM1Q9Y4G2 1056 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 PCDHGA7Q9Y5G6 932 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 SCN8AQ9UQD0 1980 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 NBASA2RRP1 2371 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 TRBV23OR9-2A0A075B6M9 112 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 CFAP69A5D8W1 941 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 CAPN8A6NHC0 703 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 TMX2-CTNND1H3BSU7 103 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 DDX3XO00571 662 aaKnown RBP eCLIP8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 HEXIM1O94992 359 aaKnown RBP8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 ECEL1O95672 775 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 CEACAM5P06731 702 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 MYCLP1P12525 358 aaPredicted RBP8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 CCL4P13236 92 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 WT1P19544 449 aaPredicted RBP8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 TRIM23P36406 574 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 RENBPP51606 427 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 AP1S1P61966 158 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 B4GALNT1Q00973 533 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZFP36L1Q07352 338 aaKnown RBP8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 NSUN2Q08J23 767 aaKnown RBP eCLIP8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 TRAF2Q12933 501 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 BIRC2Q13490 618 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 DPYSQ14117 519 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 RFTN1Q14699 578 aaPredicted RBP8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 C16orf72Q14CZ0 275 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 LINC00303Q3SY05 128 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 MANEAQ5SRI9 462 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 TXNRD3NBQ6F5E7 133 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 RAET1GQ6H3X3 334 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 CLEC17AQ6ZS10 378 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 Q6ZVL8 140 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 TSPAN33Q86UF1 283 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZNF761Q86XN6 746 aaPredicted RBP8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 NRROSQ86YC3 692 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 SLITRK4Q8IW52 837 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 FNIP1Q8TF40 1166 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZDHHC1Q8WTX9 485 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 SGF29Q96ES7 293 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 COQ10AQ96MF6 247 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 CMKLR1Q99788 373 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 NUDT22Q9BRQ3 303 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 ARHGAP9Q9BRR9 750 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 TAAR2Q9P1P5 351 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 CD84Q9UIB8 345 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 SUFUQ9UMX1 484 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 TMEM98Q9Y2Y6 226 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 HECTD1Q9ULT8 2610 aa8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 ASH1LQ9NR48 2969 aaKnown RBP8.61□□□□□ -1.03
CTDNEP1-203ENST00000570385 NAV2Q8IVL1 2488 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 NPIPB15A6NHN6 443 aaPredicted RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 RHPN2P1A8MT19 583 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 EIF3CLB5ME19 914 aaKnown RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 C9orf172C9J069 976 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 H3BRJ5 948 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 PDE2AO00408 941 aaPredicted RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 TNFRSF10CO14798 259 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 NVLO15381 856 aaKnown RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 HTRA2O43464 458 aaPredicted RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 NUDT21O43809 227 aaKnown RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 PEX11BO96011 259 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms