RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CPLX3Q8WVH0 158 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 TEKT4Q8WW24 435 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 PIH1D2Q8WWB5 315 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 KCNE4Q8WWG9 221 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 SLC39A7Q92504 469 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 TRIM11Q96F44 468 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 MCCC1Q96RQ3 725 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 ANAPC7Q9UJX3 599 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 ATXN7L1Q9ULK2 861 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 RNF215Q9Y6U7 377 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 PRSS38A1L453 326 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 KLK10O43240 276 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 FZD6O60353 706 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 SOCS5O75159 536 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 PGLSO95336 258 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 TNFP01375 233 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 CEACAM5P06731 702 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 CTPS1P17812 591 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 VIPR1P32241 457 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 ARL4AP40617 200 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 POLD2P49005 469 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 RENBPP51606 427 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 TAS2R40P59535 323 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 SRSF6Q13247 344 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 SPIDRQ14159 915 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 DPYSL3Q14195 570 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 PIGHQ14442 188 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 HLTFQ14527 1009 aaKnown RBP eCLIP13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 CERCAMQ5T4B2 595 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 NCBP2-AS2Q69YL0 99 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 Q6ZVL8 140 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 HEATR4Q86WZ0 1026 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 GKN2Q86XP6 184 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 ATPAF2Q8N5M1 289 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 TEX26Q8N6G2 289 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 PDCD6IPQ8WUM4 868 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 SYN2Q92777 582 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 GLMNQ92990 594 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 NUS1Q96E22 293 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 DTD2Q96FN9 168 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 PACSIN1Q9BY11 444 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 TEX101Q9BY14 249 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 FRMD8Q9BZ67 464 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 SEMA4CQ9C0C4 833 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 WDR26Q9H7D7 661 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 CYP4F12Q9HCS2 524 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 THSD1Q9NS62 852 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 SPATS2LQ9NUQ6 558 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 IFNKQ9P0W0 207 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 CAPN11Q9UMQ6 739 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 DOLKQ9UPQ8 538 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 SDK2Q58EX2 2172 aa13.85□□□□□ -0.19
GTF3C1-211ENST00000569653 CCDC187A0A096LP49 1063 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 B4DGG1 531 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 AGRPO00253 132 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 CACNB4O00305 520 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 TNFRSF10CO14798 259 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 EFSO43281 561 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 CBFA2T2O43439 604 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 TNFSF15O95150 251 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 SERPING1P05155 500 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 MYCLP1P12525 358 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 ETV5P41161 510 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 MMP13P45452 471 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 CDH6P55285 790 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 MAZP56270 477 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 ZBED6P86452 979 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 GALNT2Q10471 571 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 CLN3Q13286 438 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 ARHGAP40Q5TG30 622 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 DENND2CQ68D51 928 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 SPECC1LQ69YQ0 1117 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 SPRED1Q7Z699 444 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 TECPR1Q7Z6L1 1165 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 TAF8Q7Z7C8 310 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 C17orf82Q86X59 251 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 CCNJLQ8IV13 435 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 PQLC3Q8N755 202 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 Q8N9G6 341 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 FAM46DQ8NEK8 389 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 WDR36Q8NI36 951 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 PATE1Q8WXA2 126 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 GRAMD1AQ96CP6 724 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 LIN37Q96GY3 246 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 LRRN3Q9H3W5 708 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 SUDS3Q9H7L9 328 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 NT5MQ9NPB1 228 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 IP6K2Q9UHH9 426 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 PLEKHM1Q9Y4G2 1056 aa13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 PCYT1BQ9Y5K3 369 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-211ENST00000569653 TEX51A0A1B0GUA7 166 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 PRLP01236 227 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 AK4P27144 223 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 UGT1A5P35504 534 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 HSPA9P38646 679 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 POLR2LP62875 67 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 CDK3Q00526 305 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 B4GALNT1Q00973 533 aa13.83□□□□□ -0.2
GTF3C1-211ENST00000569653 DSC2Q02487 901 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms