RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	SERPINF2	P08697	491 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	FAM58BP	P0C7Q3	252 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	CD1D	P15813	335 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	TCN1	P20061	433 aa	Predicted RBP	12.68	□□□□□ -0.38
PKM-222	ENST00000568883	CST5	P28325	142 aa	Predicted RBP	12.68	□□□□□ -0.38
PKM-222	ENST00000568883	OR1E1	P30953	314 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	OR1G1	P47890	313 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	MAP7	Q14244	749 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	KCNA10	Q16322	511 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	GEN1	Q17RS7	908 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	CTXN3	Q4LDR2	81 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	LARP4	Q71RC2	724 aa	Known RBP eCLIP	12.68	□□□□□ -0.38	4e-26	■■■□□ 17.6
PKM-222	ENST00000568883	PCDH20	Q8N6Y1	951 aa	Known RBP	12.68	□□□□□ -0.38
PKM-222	ENST00000568883	SEMA3C	Q99985	751 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	CCDC68	Q9H2F9	335 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	PADI4	Q9UM07	663 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	VPS9D1	Q9Y2B5	631 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	SLC12A8	A0AV02	714 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	SYCE1L	A8MT33	242 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	GOT2	P00505	430 aa	Known RBP	12.68	□□□□□ -0.38
PKM-222	ENST00000568883	IGLV3-27	P01718	113 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	CD1E	P15812	388 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	SLC7A1	P30825	629 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	ARSD	P51689	593 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	ATP6V0D1	P61421	351 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	CACNB2	Q08289	660 aa	Predicted RBP	12.68	□□□□□ -0.38
PKM-222	ENST00000568883	SREBF2	Q12772	1141 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	KIF19	Q2TAC6	998 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	UNC50	Q53HI1	259 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	VARS2	Q5ST30	1063 aa	Known RBP	12.68	□□□□□ -0.38
PKM-222	ENST00000568883	COLGALT2	Q8IYK4	626 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.68	□□□□□ -0.38
PKM-222	ENST00000568883	TMEM102	Q8N9M5	508 aa	Predicted RBP	12.68	□□□□□ -0.38
PKM-222	ENST00000568883	OR4L1	Q8NH43	312 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	BLOC1S5	Q8TDH9	187 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	NAT14	Q8WUY8	206 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	TRIB2	Q92519	343 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
PKM-222	ENST00000568883	KLHL32	Q96NJ5	620 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	CYP2S1	Q96SQ9	504 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	TMEM181	Q9P2C4	612 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	THEG	Q9P2T0	379 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883	TMCO1	Q9UM00	188 aa		12.68	□□□□□ -0.38
PKM-222	ENST00000568883		F5H5T6	163 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	FBP2	O00757	339 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	AZIN1	O14977	448 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	NDST3	O95803	873 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	SLC4A1	P02730	911 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	COL6A1	P12109	1028 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	ZNF37A	P17032	561 aa	Predicted RBP	12.67	□□□□□ -0.38
PKM-222	ENST00000568883	MSX2	P35548	267 aa	Predicted RBP	12.67	□□□□□ -0.38
PKM-222	ENST00000568883	ETFB	P38117	255 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	STC1	P52823	247 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	TRIM71	Q2Q1W2	868 aa	Known RBP	12.67	□□□□□ -0.38
PKM-222	ENST00000568883	TYSND1	Q2T9J0	566 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	COQ5	Q5HYK3	327 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	SDHAF4	Q5VUM1	108 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	CST9	Q5W186	159 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	AP1AR	Q63HQ0	302 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	ALG1L	Q6GMV1	187 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	DHFR2	Q86XF0	187 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	MIB1	Q86YT6	1006 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	LILRA2	Q8N149	483 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	MIER2	Q8N344	545 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	GOLM1	Q8NBJ4	401 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	KLHDC9	Q8NEP7	349 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	STAG3L4	Q8TBR4	150 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	IGSF8	Q969P0	613 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	DGCR14	Q96DF8	476 aa	Known RBP	12.67	□□□□□ -0.38
PKM-222	ENST00000568883	SPATA17	Q96L03	361 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	TBATA	Q96M53	351 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	TCF12	Q99081	682 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	HAUS8	Q9BT25	410 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	AARSD1	Q9BTE6	412 aa	Known RBP	12.67	□□□□□ -0.38
PKM-222	ENST00000568883	OSBPL11	Q9BXB4	747 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	GID8	Q9NWU2	228 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	MARCH4	Q9P2E8	410 aa	Predicted RBP	12.67	□□□□□ -0.38
PKM-222	ENST00000568883	CD300A	Q9UGN4	299 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	SEPT3	Q9UH03	358 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	CRYL1	Q9Y2S2	319 aa		12.67	□□□□□ -0.38
PKM-222	ENST00000568883	TCRBV3S1	A0A5B6	114 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883		F8W810	466 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	ANGPT2	O15123	496 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	KERA	O60938	352 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	MYCN	P04198	464 aa	Predicted RBP	12.66	□□□□□ -0.38
PKM-222	ENST00000568883	GFAP	P14136	432 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	PSMC3	P17980	439 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	CES1	P23141	567 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	GRK4	P32298	578 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	RAD51	Q06609	339 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	FOXM1	Q08050	763 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	BNIP2	Q12982	314 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	PPP1R3A	Q16821	1122 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	IL23R	Q5VWK5	629 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	KANK2	Q63ZY3	851 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	CLEC6A	Q6EIG7	209 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	RGMB	Q6NW40	437 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	C8orf82	Q6P1X6	216 aa	Predicted RBP	12.66	□□□□□ -0.38
PKM-222	ENST00000568883	PAOX	Q6QHF9	649 aa		12.66	□□□□□ -0.38
PKM-222	ENST00000568883	AFTPH	Q6ULP2	937 aa		12.66	□□□□□ -0.38

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