RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, human

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHCBP1-206	ENST00000567698	PCYT1A	P49585	367 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	THBS3	P49746	956 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	METAP2	P50579	478 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	MAMLD1	Q13495	774 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	NFATC4	Q14934	902 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	MEA1	Q16626	185 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	C4orf50	Q6ZRC1	276 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	CLEC17A	Q6ZS10	378 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	IKBIP	Q70UQ0	350 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	ZC3HC1	Q86WB0	502 aa	Known RBP	4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	CCDC13	Q8IYE1	715 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	SPATA6L	Q8N4H0	392 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	C9orf106	Q8NAJ2	232 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	RND1	Q92730	232 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	ARHGEF26	Q96DR7	871 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	ZNF479	Q96JC4	524 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	C1orf74	Q96LT6	269 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	TMEM47	Q9BQJ4	181 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	IL25	Q9H293	177 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	GHITM	Q9H3K2	345 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	LTB4R2	Q9NPC1	389 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	NOX4	Q9NPH5	578 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	HINT3	Q9NQE9	182 aa	Known RBP	4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	HIF1AN	Q9NWT6	349 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	EHD2	Q9NZN4	543 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	SLC9A2	Q9UBY0	812 aa		4.86	□□□□□ -1.63
SHCBP1-206	ENST00000567698	VCY	O14598	125 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	CH25H	O95992	272 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	GLUD1	P00367	558 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	PLA2G2A	P14555	144 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	ZNF182	P17025	639 aa	Predicted RBP	4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	CD58	P19256	250 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	NFKBIA	P25963	317 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	HOXD13	P35453	343 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	GLUD2	P49448	558 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	DRG2	P55039	364 aa	Known RBP	4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	HNRNPA0	Q13151	305 aa	Known RBP	4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	LCE1A	Q5T7P2	110 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	DPPA4	Q7L190	304 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	CHERP	Q8IWX8	916 aa	Known RBP	4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	OR14A16	Q8NHC5	309 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	OR14L1P	Q8NHC6	308 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	SMARCE1	Q969G3	411 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	TXNDC15	Q96J42	360 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	ACOX2	Q99424	681 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	PPP1R3E	Q9H7J1	279 aa		4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	RANGRF	Q9HD47	186 aa	Predicted RBP	4.85	□□□□□ -1.63
SHCBP1-206	ENST00000567698	TRIP12	Q14669	1992 aa	Predicted RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	ARHGEF40	Q8TER5	1519 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	FSD2	A1L4K1	749 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	LINC01553	A4QN01	128 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	BTBD18	B2RXH4	712 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	KCNAB3	O43448	404 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	HCRTR2	O43614	444 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	PLRG1	O43660	514 aa	Known RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	ZBED4	O75132	1171 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	MTA2	O94776	668 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	IPO7	O95373	1038 aa	Known RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	C21orf33	P30042	268 aa	Predicted RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	SSTR2	P30874	369 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	ARL3	P36405	182 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	PDLIM4	P50479	330 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	POLG	P54098	1239 aa	Predicted RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	FOXD4	Q12950	439 aa	Predicted RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	DHX34	Q14147	1143 aa	Known RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	NEDD9	Q14511	834 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	IRF3	Q14653	427 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	ASTE1	Q2TB18	679 aa	Predicted RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	PMS2CL	Q68D20	193 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	JADE1	Q6IE81	842 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	TYW3	Q6IPR3	259 aa	Known RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	KLHL24	Q6TFL4	600 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	CLEC4G	Q6UXB4	293 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	CFAP77	Q6ZQR2	320 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	SEPT14	Q6ZU15	432 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	ZNF114	Q8NC26	417 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	OR2AK2	Q8NG84	335 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	SPATA22	Q8NHS9	363 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	FAM216A	Q8WUB2	273 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	RHBDF1	Q96CC6	855 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	RRNAD1	Q96FB5	475 aa	Known RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	WAC	Q9BTA9	647 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	IFIH1	Q9BYX4	1025 aa	Known RBP	4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	GPR108	Q9NPR9	543 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	RCOR1	Q9UKL0	485 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	ERVK-11	Q9UQG0	969 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	LYVE1	Q9Y5Y7	322 aa		4.84	□□□□□ -1.63
SHCBP1-206	ENST00000567698	IGHV4-30-4	P0DP06	118 aa		4.83	□□□□□ -1.64
SHCBP1-206	ENST00000567698	KRT10	P13645	584 aa		4.83	□□□□□ -1.64
SHCBP1-206	ENST00000567698	RAD23B	P54727	409 aa		4.83	□□□□□ -1.64
SHCBP1-206	ENST00000567698	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
SHCBP1-206	ENST00000567698	AMZ1	Q400G9	498 aa		4.83	□□□□□ -1.64
SHCBP1-206	ENST00000567698	LRIF1	Q5T3J3	769 aa		4.83	□□□□□ -1.64
SHCBP1-206	ENST00000567698	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.83	□□□□□ -1.64
SHCBP1-206	ENST00000567698	ZNF280D	Q6N043	979 aa		4.83	□□□□□ -1.64
SHCBP1-206	ENST00000567698	KLHL35	Q6PF15	583 aa		4.83	□□□□□ -1.64
SHCBP1-206	ENST00000567698	PCGF5	Q86SE9	256 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms