RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 YIPF1Q9Y548 306 aa17.77■□□□□ 0.44
CMTM3-214ENST00000567572 KIAA1671Q9BY89 1806 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 CARNS1A5YM72 827 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 A8MT66 165 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 SORBS2O94875 1100 aaKnown RBP17.76■□□□□ 0.43
CMTM3-214ENST00000567572 ATP5C1P36542 298 aaKnown RBP17.76■□□□□ 0.43
CMTM3-214ENST00000567572 CCR10P46092 362 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 HSPA13P48723 471 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 ERFP50548 548 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 ATP4BP51164 291 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 ACVR1Q04771 509 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 IL10RBQ08334 325 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 RAB33AQ14088 237 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 FAM45BPQ6NSW5 357 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 CNSTQ6PJW8 725 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.76■□□□□ 0.43
CMTM3-214ENST00000567572 ADCY4Q8NFM4 1077 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 OR13J1Q8NGT2 312 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 FAM45AQ8TCE6 357 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 L3HYPDHQ96EM0 354 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 HMCESQ96FZ2 354 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 ZNF512Q96ME7 567 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-214ENST00000567572 MRPL1Q9BYD6 325 aaKnown RBP17.76■□□□□ 0.43
CMTM3-214ENST00000567572 DTNAQ9Y4J8 743 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 PTPRSQ13332 1948 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 MYLKQ15746 1914 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 TCAF2A6NFQ2 919 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 URODP06132 367 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 UBTFL6P0CB48 400 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-214ENST00000567572 VCLP18206 1134 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 ALDH1A3P47895 512 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 KCNQ1P51787 676 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 CSHL1Q14406 222 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 HECTD2Q5U5R9 776 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 LPCAT4Q643R3 524 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 RIN3Q8TB24 985 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 TRMT2BQ96GJ1 504 aaKnown RBP17.76■□□□□ 0.43
CMTM3-214ENST00000567572 CENPKQ9BS16 269 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 RETREG1Q9H6L5 497 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 NT5MQ9NPB1 228 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 GTSE1Q9NYZ3 720 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 EPS15L1Q9UBC2 864 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 SUCOQ9UBS9 1254 aaKnown RBP17.76■□□□□ 0.43
CMTM3-214ENST00000567572 SARDHQ9UL12 918 aa17.76■□□□□ 0.43
CMTM3-214ENST00000567572 LOC285095A0A1B0GVY8 99 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 TRIM38O00635 465 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 DENRO43583 198 aaKnown RBP17.75■□□□□ 0.43
CMTM3-214ENST00000567572 BAIAP3O94812 1187 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 CAPNS1P04632 268 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 JUNP05412 331 aaKnown RBP17.75■□□□□ 0.43
CMTM3-214ENST00000567572 CD86P42081 329 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 MAPKAPK2P49137 400 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 CCNHP51946 323 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-214ENST00000567572 AQP4P55087 323 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 YBEYP58557 167 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-214ENST00000567572 ADGRE1Q14246 886 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 PCSK7Q16549 785 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 MMEL1Q495T6 779 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 C5orf22Q49AR2 442 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 HECTD3Q5T447 861 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 RBM20Q5T481 1227 aaKnown RBP17.75■□□□□ 0.43
CMTM3-214ENST00000567572 TMEM199Q8N511 208 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 GPR150Q8NGU9 434 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 ZFAND2BQ8WV99 257 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 MYEOVQ96EZ4 313 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 RPRD1AQ96P16 312 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-214ENST00000567572 TUBGCP5Q96RT8 1024 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 OLFM1Q99784 485 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 RAB26Q9ULW5 256 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 TBC1D30Q9Y2I9 924 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 VWA7Q9Y334 891 aa17.75■□□□□ 0.43
CMTM3-214ENST00000567572 COCHO43405 550 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 RNASEH1O60930 286 aaKnown RBP17.74■□□□□ 0.43
CMTM3-214ENST00000567572 GJB5O95377 273 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 EPOP01588 193 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 MMP2P08253 660 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 ACRP10323 421 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 HLA-DPA1P20036 260 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 IMPDH1P20839 514 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 TACR2P21452 398 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 SH3BGRP55822 239 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-214ENST00000567572 CEACAM7Q14002 265 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 TMEM198Q66K66 360 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 HACD2Q6Y1H2 254 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 NECAB2Q7Z6G3 386 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 CUZD1Q86UP6 607 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 MARVELD2Q8N4S9 558 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 HIPK4Q8NE63 616 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 ASB9Q96DX5 294 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 LRGUKQ96M69 825 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 ATXN3LQ9H3M9 355 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 FGF1P05230 155 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 CCDC166P0CW27 439 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 ENO3P13929 434 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-214ENST00000567572 XRCC1P18887 633 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-214ENST00000567572 ACADVLP49748 655 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 PRAMEP78395 509 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 GRAMD1BQ3KR37 738 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 RNF220Q5VTB9 566 aa17.74■□□□□ 0.43
CMTM3-214ENST00000567572 CIR1Q86X95 450 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms