RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
CLK3-218ENST00000566926 ERP44Q9BS26 406 aa13.49□□□□□ -0.25
CLK3-218ENST00000566926 PARD6BQ9BYG5 372 aa13.49□□□□□ -0.25
CLK3-218ENST00000566926 FAM114A2Q9NRY5 505 aa13.49□□□□□ -0.25
CLK3-218ENST00000566926 RBM22Q9NW64 420 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLK3-218ENST00000566926 KCTD5Q9NXV2 234 aa13.49□□□□□ -0.25
CLK3-218ENST00000566926 DTLQ9NZJ0 730 aa13.49□□□□□ -0.25
CLK3-218ENST00000566926 GGT7Q9UJ14 662 aa13.49□□□□□ -0.25
CLK3-218ENST00000566926 DNPEPQ9ULA0 475 aa13.49□□□□□ -0.25
CLK3-218ENST00000566926 APOBEC2Q9Y235 224 aaKnown RBP13.49□□□□□ -0.25
CLK3-218ENST00000566926 CA5BQ9Y2D0 317 aa13.49□□□□□ -0.25
CLK3-218ENST00000566926 R3HDM2Q9Y2K5 976 aaKnown RBP13.49□□□□□ -0.25
CLK3-218ENST00000566926 HEY1Q9Y5J3 304 aa13.49□□□□□ -0.25
CLK3-218ENST00000566926 TTI1O43156 1089 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 SPINT1O43278 529 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 MTSS1O43312 755 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 HTRA2O43464 458 aaPredicted RBP13.48□□□□□ -0.25
CLK3-218ENST00000566926 LZTS3O60299 673 aaPredicted RBP13.48□□□□□ -0.25
CLK3-218ENST00000566926 CBFA2T3O75081 653 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 RBP3P10745 1247 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 EPHA8P29322 1005 aaPredicted RBP13.48□□□□□ -0.25
CLK3-218ENST00000566926 ACTN2P35609 894 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 MMP12P39900 470 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 PTGIRP43119 386 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 CLDN2P57739 230 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 MAXP61244 160 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 YPEL5P62699 121 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 GBE1Q04446 702 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 PPIDQ08752 370 aaKnown RBP13.48□□□□□ -0.25
CLK3-218ENST00000566926 SNX1Q13596 522 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 PTK6Q13882 451 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 AGERQ15109 404 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 PRAMEF14Q5SWL7 426 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 ARMC12Q5T9G4 340 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 TTC27Q6P3X3 843 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 GSTA5Q7RTV2 222 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 PGBD5Q8N414 524 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 SAP25Q8TEE9 199 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 PDCD6IPQ8WUM4 868 aaKnown RBP13.48□□□□□ -0.25
CLK3-218ENST00000566926 HNRNPLLQ8WVV9 542 aaKnown RBP13.48□□□□□ -0.25
CLK3-218ENST00000566926 ATG4AQ8WYN0 398 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 BMFQ96LC9 184 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 CAMK1GQ96NX5 476 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 KLF6Q99612 283 aaPredicted RBP13.48□□□□□ -0.25
CLK3-218ENST00000566926 SEMA3CQ99985 751 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 WRAP53Q9BUR4 548 aaKnown RBP13.48□□□□□ -0.25
CLK3-218ENST00000566926 NOD2Q9HC29 1040 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 PHTF1Q9UMS5 762 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 KNTC1P50748 2209 aa13.48□□□□□ -0.25
CLK3-218ENST00000566926 SPAARA0A1B0GVQ0 90 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 POM121BA6NF01 834 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 STK10O94804 968 aaKnown RBP13.47□□□□□ -0.25
CLK3-218ENST00000566926 MAP3K6O95382 1288 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 CPP00450 1065 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 ELFN1P0C7U0 828 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 CYP2A6P11509 494 aaPredicted RBP13.47□□□□□ -0.25
CLK3-218ENST00000566926 C6P13671 934 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 PECAM1P16284 738 aaPredicted RBP13.47□□□□□ -0.25
CLK3-218ENST00000566926 ITIH2P19823 946 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 PMLP29590 882 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 LIG3P49916 1009 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 THOP1P52888 689 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 HNRNPKP61978 463 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLK3-218ENST00000566926 IL9RQ01113 521 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 GUCY2DQ02846 1103 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 CAV1Q03135 178 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 SLC10A2Q12908 348 aaPredicted RBP13.47□□□□□ -0.25
CLK3-218ENST00000566926 LRRC14Q15048 493 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 ALG1LQ6GMV1 187 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 DARS2Q6PI48 645 aaKnown RBP13.47□□□□□ -0.25
CLK3-218ENST00000566926 DPPA4Q7L190 304 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 ZSWIM9Q86XI8 627 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 BAHD1Q8TBE0 780 aaPredicted RBP13.47□□□□□ -0.25
CLK3-218ENST00000566926 TFB1MQ8WVM0 346 aaKnown RBP13.47□□□□□ -0.25
CLK3-218ENST00000566926 CENPTQ96BT3 561 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 OLFM3Q96PB7 478 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 TSPYL1Q9H0U9 437 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 PCDH9Q9HC56 1237 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 DMGDHQ9UI17 866 aaKnown RBP13.47□□□□□ -0.25
CLK3-218ENST00000566926 ANGPTL2Q9UKU9 493 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 PCDHGC4Q9Y5F7 938 aa13.47□□□□□ -0.25
CLK3-218ENST00000566926 SPTY2D1-AS1A0A0U1RR47 76 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 NEMP2A6NFY4 417 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 BHMG1C9JSJ3 638 aaPredicted RBP13.46□□□□□ -0.25
CLK3-218ENST00000566926 H3BM21 787 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 H7C0C1 242 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 SMAPO00193 183 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 RAD51BO15315 384 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 TNFSF14O43557 240 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 ATP5OP48047 213 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 PFN3P60673 137 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 SLC7A5Q01650 507 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 AP1B1Q10567 949 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 CALCOCO2Q13137 446 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 PDE1CQ14123 709 aaPredicted RBP13.46□□□□□ -0.25
CLK3-218ENST00000566926 SHBQ15464 509 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 DUPD1Q68J44 220 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 LIPIQ6XZB0 460 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 CEP128Q6ZU80 1094 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 USP45Q70EL2 814 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms