RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 PSMD11O00231 422 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 NEMP1O14524 444 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 DNALI1O14645 258 aaPredicted RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 MAP3K13O43283 966 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 SEC31AO94979 1220 aaKnown RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 FSBPO95073 299 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 EPN2O95208 641 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 CLDN7O95471 211 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 SOD1P00441 154 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 GOLGA6DP0CG33 693 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 CD27P26842 260 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 MAOBP27338 520 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 ACTN2P35609 894 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 IGFALSP35858 605 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 ETV3P41162 512 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 MAGEA3P43357 314 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 DHPSP49366 369 aaPredicted RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 ZNF140P52738 457 aaPredicted RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 RPS21P63220 83 aaKnown RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 NHLH1Q02575 133 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 PTSQ03393 145 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 ELF2Q15723 593 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 WSCD2Q2TBF2 565 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 LAYNQ6UX15 382 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 GCNT7Q6ZNI0 430 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 SYDE1Q6ZW31 735 aaPredicted RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 MICALCLQ6ZW33 695 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 TECPR1Q7Z6L1 1165 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 AGGF1Q8N302 714 aaeCLIP8.17□□□□□ -1.1
CDH13-208ENST00000566333 PAF1Q8N7H5 531 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 NAT8LQ8N9F0 302 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 TP53I13Q8NBR0 393 aaPredicted RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 OR52K1Q8NGK4 314 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 ASB12Q8WXK4 309 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 SNX19Q92543 992 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 DTD2Q96FN9 168 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 SLC6A18Q96N87 628 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 MYOCQ99972 504 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 MAGEE1Q9HCI5 957 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 GPR27Q9NS67 375 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 TMEM74BQ9NUR3 256 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 GOLGA6AQ9NYA3 693 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 GRHL1Q9NZI5 618 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 NFKBIL1Q9UBC1 381 aaPredicted RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 ASIC3Q9UHC3 531 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 FEZ2Q9UHY8 353 aaPredicted RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 EIF2B4Q9UI10 523 aaKnown RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 PILRBQ9UKJ0 227 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 TPX2Q9ULW0 747 aaKnown RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 SHOC2Q9UQ13 582 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 CA5BQ9Y2D0 317 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 SPTBN4Q9H254 2564 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 PTPRZ1P23471 2315 aaPredicted RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 FAM187AA6NFU0 413 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 E7EVH7 732 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 H0Y8X5 98 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 K7ESM1 405 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 GAPDHSO14556 408 aaPredicted RBP8.16□□□□□ -1.1
CDH13-208ENST00000566333 SLC31A1O15431 190 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 PSMD3O43242 534 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 LDB2O43679 373 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 TM7SF2O76062 418 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 RECQL5O94762 991 aaPredicted RBP8.16□□□□□ -1.1
CDH13-208ENST00000566333 RHOBTB1O94844 696 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 SLC4A1P02730 911 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 WNT1P04628 370 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 CYP2A6P11509 494 aaPredicted RBP8.16□□□□□ -1.1
CDH13-208ENST00000566333 HNRNPA2B1P22626 353 aaKnown RBP8.16□□□□□ -1.1
CDH13-208ENST00000566333 RPL21P46778 160 aaKnown RBP8.16□□□□□ -1.1
CDH13-208ENST00000566333 TERF1P54274 439 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 CDK16Q00536 496 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 CDH17Q12864 832 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 MTM1Q13496 603 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 IRF4Q15306 451 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 SETMARQ53H47 684 aaPredicted RBP8.16□□□□□ -1.1
CDH13-208ENST00000566333 PLA2G2CQ5R387 149 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 CERCAMQ5T4B2 595 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 HENMT1Q5T8I9 393 aaKnown RBP8.16□□□□□ -1.1
CDH13-208ENST00000566333 IZUMO3Q5VZ72 239 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 LAIR1Q6GTX8 287 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 C8orf74Q6P047 294 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 Q6ZVL8 140 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 CYP2U1Q7Z449 544 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 GLT6D1Q7Z4J2 308 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 TMC3Q7Z5M5 1100 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 LINC00523Q86TU6 105 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 CAND1Q86VP6 1230 aaKnown RBP8.16□□□□□ -1.1
CDH13-208ENST00000566333 NDUFAF2Q8N183 169 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 SLC22A18ASQ8N1D0 253 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 MMGT1Q8N4V1 131 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 ZCCHC9Q8N567 271 aaKnown RBP8.16□□□□□ -1.1
CDH13-208ENST00000566333 DENND6BQ8NEG7 585 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 CCHCR1Q8TD31 782 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 BLOC1S5Q8TDH9 187 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 CENPTQ96BT3 561 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 NUS1Q96E22 293 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 LOXL4Q96JB6 756 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 SERPINB12Q96P63 405 aa8.16□□□□□ -1.1
CDH13-208ENST00000566333 WDR83Q9BRX9 315 aaKnown RBP8.16□□□□□ -1.1
CDH13-208ENST00000566333 CARD6Q9BX69 1037 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms