RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 YIPF6Q96EC8 236 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SLC45A3Q96JT2 553 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ZNF300Q96RE9 604 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 KCNS3Q9BQ31 491 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 GATA5Q9BWX5 397 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 GPRC5CQ9NQ84 441 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 RBAKQ9NYW8 714 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 ANAPC7Q9UJX3 599 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 KLHL20Q9Y2M5 609 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 MRPS23Q9Y3D9 190 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 C3orf70A6NLC5 250 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 USP17L5A8MUK1 530 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SDHDO14521 159 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 TOP3BO95985 862 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 RPS17P08708 135 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 AMHR2Q16671 573 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PXDC1Q5TGL8 231 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 XAF1Q6GPH4 301 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CYS1Q717R9 158 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 GDPD3Q7L5L3 318 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 BTLAQ7Z6A9 289 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 LINC00523Q86TU6 105 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PIGZQ86VD9 579 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SLC47A2Q86VL8 602 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 QKIQ96PU8 341 aaKnown RBP eCLIP2.92□□□□□ -1.943e-7■■■■□ 26.4
CHD9-218ENST00000566029 SAV1Q9H4B6 383 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 GREM2Q9H772 168 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 TOPORSQ9NS56 1045 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 EXD2Q9NVH0 621 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 MARCOQ9UEW3 520 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 GMEB2Q9UKD1 530 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 HCN4Q9Y3Q4 1203 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 MYO5BQ9ULV0 1848 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ANKRD36CQ5JPF3 1778 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 C1orf232A0A0U1RR37 186 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SMCO3A2RU48 225 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 FAM86B1E9PN63 330 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 VWA5AO00534 786 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CLIC2O15247 247 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ERN1O75460 977 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 LDOC1O95751 146 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 OLFM2O95897 454 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PTTG1O95997 202 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 GCP02774 474 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 GSNP06396 782 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 HTR1AP08908 422 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 AKR1B1P15121 316 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CD58P19256 250 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SLC26A3P40879 764 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 LEPRP48357 1165 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 MAN2A2P49641 1150 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 C5orf22Q49AR2 442 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 RUNDC3AQ59EK9 446 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ERAP2Q6P179 960 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SYNE4Q8N205 404 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 OR10Z1Q8NGY1 313 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 DDX1Q92499 740 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 TPD52L3Q96J77 140 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 UBE2TQ9NPD8 197 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 MOCS1Q9NZB8 636 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SIX4Q9UIU6 781 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SNX7Q9UNH6 387 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 LOC102724428A0A0B4J2F2 783 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ZNF623O75123 536 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 BMP1P13497 986 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 GRK3P35626 688 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 IL12RB1P42701 662 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CAPZA2P47755 286 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SIK1P57059 783 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 FCHO2Q0JRZ9 810 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CATSPEREQ5SY80 951 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 POLNQ7Z5Q5 900 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SLFN12Q8IYM2 578 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 GLB1L3Q8NCI6 653 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 SLITRK1Q96PX8 696 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SDCBP2Q9H190 292 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 BOLA1Q9Y3E2 137 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 TCRBV5S1A1TA0A578 114 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SOCS2O14508 198 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 TSPAN1O60635 241 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CCNKO75909 580 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 RPN2P04844 631 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 THEGLP0DJG4 465 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 COL6A1P12109 1028 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 KCNA6P17658 529 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 GJA5P36382 358 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 MAGEA12P43365 314 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ABCE1P61221 599 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 NOMO3P69849 1222 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SLC22A16Q86VW1 577 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 LDHDQ86WU2 507 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 MICALL2Q8IY33 904 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 LNX2Q8N448 690 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SMG8Q8ND04 991 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 CSGALNACT1Q8TDX6 532 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 FNIP1Q8TF40 1166 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 THRSPQ92748 146 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 KIAA1143Q96AT1 154 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 SIGLEC10Q96LC7 697 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 TEKT5Q96M29 485 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms