RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TAB3Q8N5C8 712 aaPredicted RBP12.65□□□□□ -0.38
SF3B3-206ENST00000565990 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.38
SF3B3-206ENST00000565990 LPCAT1Q8NF37 534 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 OR14C36Q8NHC7 312 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 ASB12Q8WXK4 309 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 RMDN1Q96DB5 314 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 SMIM14Q96QK8 99 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 FMO2Q99518 471 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 TBL1YQ9BQ87 522 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 FICDQ9BVA6 458 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 DUSP15Q9H1R2 295 aaPredicted RBP12.65□□□□□ -0.38
SF3B3-206ENST00000565990 CASS4Q9NQ75 786 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 TNRC6BQ9UPQ9 1833 aaKnown RBP12.65□□□□□ -0.39
SF3B3-206ENST00000565990 TBC1D3DA0A087WVF3 549 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TBC1D3IA0A087WXS9 549 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TBC1D3EA0A087X179 549 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TBC1D3KA0A087X1G2 549 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TCRBV7S3A2A0A539 114 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TBC1D3FA6NER0 549 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-206ENST00000565990 CAPN8A6NHC0 703 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 NPIPB15A6NHN6 443 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-206ENST00000565990 LRRC72A6NJI9 287 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TBC1D3LB9A6J9 549 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 E7EVH7 732 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 SMAPO00193 183 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 AP3B1O00203 1094 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 DNALI1O14645 258 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-206ENST00000565990 LATO43561 262 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 RPP40O75818 363 aaKnown RBP12.64□□□□□ -0.39
SF3B3-206ENST00000565990 KIAA0754O94854 1291 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TBC1D3HP0C7X1 549 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 CYP2A6P11509 494 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-206ENST00000565990 CTPS1P17812 591 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 BCKDHBP21953 392 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 LHCGRP22888 699 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 XPAP23025 273 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-206ENST00000565990 VIPR1P32241 457 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 CCT5P48643 541 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 CCR5P51681 352 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 EPHB1P54762 984 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 PPP2R2AP63151 447 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 BASP1P80723 227 aaKnown RBP12.64□□□□□ -0.39
SF3B3-206ENST00000565990 OLIG2Q13516 323 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 GALNT3Q14435 633 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 SLMAPQ14BN4 828 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 PTPRRQ15256 657 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TMEM259Q4ZIN3 620 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 ANKRD22Q5VYY1 191 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TBC1D3GQ6DHY5 549 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TBC1D3CQ6IPX1 549 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 HIBCHQ6NVY1 386 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-206ENST00000565990 LIPIQ6XZB0 460 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 CEP128Q6ZU80 1094 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 ZNF534Q76KX8 674 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 FAM124AQ86V42 546 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 PPIL6Q8IXY8 311 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 C10orf67Q8IYJ2 551 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TBC1D3Q8IZP1 549 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-206ENST00000565990 EID2BQ96D98 161 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 PGM2Q96G03 612 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 C19orf43Q9BQ61 176 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 C1QTNF2Q9BXJ5 285 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 FSD1LQ9BXM9 530 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 TRABDQ9H4I3 376 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 C6orf106Q9H6K1 298 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-206ENST00000565990 HACD3Q9P035 362 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 B4GALT6Q9UBX8 382 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 MTRF1LQ9UGC7 380 aaKnown RBP12.64□□□□□ -0.39
SF3B3-206ENST00000565990 INVSQ9Y283 1065 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 FAM169AQ9Y6X4 670 aa12.64□□□□□ -0.39
SF3B3-206ENST00000565990 PSMD11O00231 422 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 RNGTTO60942 597 aaKnown RBP12.63□□□□□ -0.39
SF3B3-206ENST00000565990 NDUFS2O75306 463 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 USP12O75317 370 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 PRKCGP05129 697 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 IGHV4-34P06331 123 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 ALPIP09923 528 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 MLNP12872 115 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 ZNF30P17039 623 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 GM2AP17900 193 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 PSMA3P25788 255 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 GRIA1P42261 906 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 RPL21P46778 160 aaKnown RBP12.63□□□□□ -0.39
SF3B3-206ENST00000565990 NPY2RP49146 381 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 VPS41P49754 854 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 LIG3P49916 1009 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 RPS21P63220 83 aaKnown RBP12.63□□□□□ -0.39
SF3B3-206ENST00000565990 MRPS25P82663 173 aaKnown RBP12.63□□□□□ -0.39
SF3B3-206ENST00000565990 ZNF844Q08AG5 666 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 UAP1Q16222 522 aaPredicted RBP12.63□□□□□ -0.39
SF3B3-206ENST00000565990 ZNF284Q2VY69 593 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 SYCP2LQ5T4T6 812 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 ARMC3Q5W041 872 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 KIAA0895LQ68EN5 471 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 KIAA1161Q6NSJ0 714 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 USP45Q70EL2 814 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 TECPR1Q7Z6L1 1165 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 CAND1Q86VP6 1230 aaKnown RBP12.63□□□□□ -0.39
SF3B3-206ENST00000565990 NLRP8Q86W28 1048 aa12.63□□□□□ -0.39
SF3B3-206ENST00000565990 HORMAD1Q86X24 394 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms