RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 MTRF1LQ9UGC7 380 aaKnown RBP15.29■□□□□ 0.04
KNOP1-203ENST00000565844 NFU1Q9UMS0 254 aa15.29■□□□□ 0.04
KNOP1-203ENST00000565844 FADS3Q9Y5Q0 445 aa15.29■□□□□ 0.04
KNOP1-203ENST00000565844 SPTBN2O15020 2390 aa15.29■□□□□ 0.04
KNOP1-203ENST00000565844 MED19A0JLT2 244 aaPredicted RBP15.28■□□□□ 0.04
KNOP1-203ENST00000565844 AP1G1O43747 822 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 CRTAMO95727 393 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 ECHS1P30084 290 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 HOXA6P31267 233 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 RALGDSQ12967 914 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 MSLNQ13421 630 aaPredicted RBP15.28■□□□□ 0.04
KNOP1-203ENST00000565844 ARHGEF7Q14155 803 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 NAA30Q147X3 362 aaPredicted RBP15.28■□□□□ 0.04
KNOP1-203ENST00000565844 TAF1AQ15573 450 aaPredicted RBP15.28■□□□□ 0.04
KNOP1-203ENST00000565844 BBS9Q3SYG4 887 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 MSS51Q4VC12 460 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 CCDC38Q502W7 563 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 LRRC66Q68CR7 880 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 LAIR1Q6GTX8 287 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 CASC4Q6P4E1 433 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 CRTC1Q6UUV9 634 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 CENPUQ71F23 418 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 WDR5BQ86VZ2 330 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 CCDC25Q86WR0 208 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 MPP5Q8N3R9 675 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 FAM160A2Q8N612 972 aaPredicted RBP15.28■□□□□ 0.04
KNOP1-203ENST00000565844 GPR161Q8N6U8 529 aaKnown RBP15.28■□□□□ 0.04
KNOP1-203ENST00000565844 PPHLN1Q8NEY8 458 aaKnown RBP15.28■□□□□ 0.04
KNOP1-203ENST00000565844 BRSK1Q8TDC3 778 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 RLN3Q8WXF3 142 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 FMO2Q99518 471 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 GPR63Q9BZJ6 419 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 FOXP3Q9BZS1 431 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 BTBD1Q9H0C5 482 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 TRABDQ9H4I3 376 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.28■□□□□ 0.04
KNOP1-203ENST00000565844 ZNF106Q9H2Y7 1883 aaKnown RBP15.28■□□□□ 0.04
KNOP1-203ENST00000565844 LAMA1P25391 3075 aa15.28■□□□□ 0.04
KNOP1-203ENST00000565844 HEATR9A2RTY3 570 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 FAM47DPA6NHR8 397 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 SDR42E2A6NKP2 422 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 AURKAO14965 403 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 TSPAN6O43657 245 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 BANF1O75531 89 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 PCDH8O95206 1070 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 CLDN7O95471 211 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 ELFN1P0C7U0 828 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 ZNF30P17039 623 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 TNFRSF8P28908 595 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 OXTRP30559 389 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 ACSL1P33121 698 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 DHX9Q08211 1270 aaKnown RBP15.27■□□□□ 0.04
KNOP1-203ENST00000565844 PDIA2Q13087 525 aaKnown RBP15.27■□□□□ 0.04
KNOP1-203ENST00000565844 NUMA1Q14980 2115 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 ELF2Q15723 593 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 CNGA3Q16281 694 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 CDKN3Q16667 212 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 TMEM52BQ4KMG9 183 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 HP1BP3Q5SSJ5 553 aaPredicted RBP15.27■□□□□ 0.04
KNOP1-203ENST00000565844 GSPT2Q8IYD1 628 aaKnown RBP15.27■□□□□ 0.04
KNOP1-203ENST00000565844 CXorf40AQ8TE69 158 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 ZFYVE1Q9HBF4 777 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 SGK2Q9HBY8 427 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 PREBQ9HCU5 417 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 SAMD15Q9P1V8 674 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 INVSQ9Y283 1065 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 ARL5AQ9Y689 179 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 MAD1L1Q9Y6D9 718 aa15.27■□□□□ 0.04
KNOP1-203ENST00000565844 CACNA1AO00555 2505 aa15.27■□□□□ 0.03
KNOP1-203ENST00000565844 CEP192Q8TEP8 1941 aa15.27■□□□□ 0.03
KNOP1-203ENST00000565844 PLXNA2O75051 1894 aa15.27■□□□□ 0.03
KNOP1-203ENST00000565844 TBC1D3DA0A087WVF3 549 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 TBC1D3IA0A087WXS9 549 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 TBC1D3EA0A087X179 549 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 TBC1D3KA0A087X1G2 549 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 IGHV1OR15-9A0A0B4J2B8 117 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 CCDC78A2IDD5 438 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 TBC1D3FA6NER0 549 aaPredicted RBP15.26■□□□□ 0.03
KNOP1-203ENST00000565844 LRRC72A6NJI9 287 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 C2orf81A6NN90 581 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 TBC1D3LB9A6J9 549 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 MMP20O60882 483 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 RPP40O75818 363 aaKnown RBP15.26■□□□□ 0.03
KNOP1-203ENST00000565844 SEMA4FO95754 770 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 TBC1D3HP0C7X1 549 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 ADRA1DP25100 572 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 MCM3P25205 808 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 CD6P30203 668 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 LIG3P49916 1009 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 VSNL1P62760 191 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 LAMB3Q13751 1172 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 MAP7D1Q3KQU3 841 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 USP39Q53GS9 565 aaKnown RBP15.26■□□□□ 0.03
KNOP1-203ENST00000565844 PCID2Q5JVF3 399 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 TBC1D3GQ6DHY5 549 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 TBC1D3CQ6IPX1 549 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 WDR93Q6P2C0 686 aa15.26■□□□□ 0.03
KNOP1-203ENST00000565844 TBC1D3Q8IZP1 549 aaPredicted RBP15.26■□□□□ 0.03
KNOP1-203ENST00000565844 AGGF1Q8N302 714 aaeCLIP15.26■□□□□ 0.03
KNOP1-203ENST00000565844 TTC30BQ8N4P2 665 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms