RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 TMEM9Q9P0T7 183 aa9.07□□□□□ -0.96
VPS9D1-205ENST00000565452 TAAR2Q9P1P5 351 aa9.07□□□□□ -0.96
VPS9D1-205ENST00000565452 PADI1Q9ULC6 663 aa9.07□□□□□ -0.96
VPS9D1-205ENST00000565452 HPCAL4Q9UM19 191 aa9.07□□□□□ -0.96
VPS9D1-205ENST00000565452 COQ4Q9Y3A0 265 aa9.07□□□□□ -0.96
VPS9D1-205ENST00000565452 PCDHGA6Q9Y5G7 932 aa9.07□□□□□ -0.96
VPS9D1-205ENST00000565452 FBN3Q75N90 2809 aa9.07□□□□□ -0.96
VPS9D1-205ENST00000565452 PRSS44E7EML9 344 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 SLC16A3O15427 465 aaKnown RBP9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 KRT86O43790 486 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 DIAPH2O60879 1101 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 SRGAP2O75044 1071 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 EPB41P11171 864 aaKnown RBP9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 CASP14P31944 242 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 ETFBP38117 255 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 GGCXP38435 758 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 LIG3P49916 1009 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 ARF5P84085 180 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 GNA12Q03113 381 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 ZRSR2Q15696 482 aaKnown RBP9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 CHRNA6Q15825 494 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 KCTD16Q68DU8 428 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 TTI2Q6NXR4 508 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 ERAP2Q6P179 960 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 SPNS3Q6ZMD2 512 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 GDF7Q7Z4P5 450 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 UBR7Q8N806 425 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 Q8NA96 180 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 ENOX1Q8TC92 643 aaKnown RBP9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 NCSTNQ92542 709 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 SNRNP40Q96DI7 357 aaKnown RBP9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 STAMBPL1Q96FJ0 436 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 SLC2A13Q96QE2 648 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 SLC38A3Q99624 504 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 TRIM55Q9BYV6 548 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 TKTL2Q9H0I9 626 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 ING2Q9H160 280 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 TRNAU1APQ9NX07 287 aaKnown RBP9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 MPP6Q9NZW5 540 aa9.06□□□□□ -0.96
VPS9D1-205ENST00000565452 CCDC168Q8NDH2 2452 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 PRSS38A1L453 326 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 CFAP69A5D8W1 941 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 ZSCAN5CA6NGD5 496 aaPredicted RBP9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 E5RJQ4 531 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 LRRTM2O43300 516 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 MED7O43513 233 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 MT-ND3P03897 115 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 CSF2RBP32927 897 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 TRIM23P36406 574 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 MARSP56192 900 aaKnown RBP9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 ITGA1P56199 1179 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 FOXM1Q08050 763 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 TPD52L1Q16890 204 aaPredicted RBP9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 BRMS1LQ5PSV4 323 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 TCERG1LQ5VWI1 586 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 KLHL10Q6JEL2 608 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 NRROSQ86YC3 692 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 ZNF683Q8IZ20 524 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 IQCKQ8N0W5 287 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 CISD2Q8N5K1 135 aaKnown RBP9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 PLA2G15Q8NCC3 412 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 GALNT6Q8NCL4 622 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 HDAC11Q96DB2 347 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 BPIFA3Q9BQP9 254 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 CARS2Q9HA77 564 aaKnown RBP9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 ASF1BQ9NVP2 202 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 ASNSD1Q9NWL6 643 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 LUZP4Q9P127 313 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 RCOR3Q9P2K3 495 aaPredicted RBP9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 MFHAS1Q9Y4C4 1052 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 NIPBLQ6KC79 2804 aaeCLIP9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 SVILO95425 2214 aa9.05□□□□□ -0.96
VPS9D1-205ENST00000565452 IGLV3-10A0A075B6K4 115 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 SMTNL1A8MU46 457 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 C21orf140B9A014 251 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 HSF2BPO75031 334 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 CD160O95971 181 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 F9P00740 461 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 CALCAP01258 141 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 PTGER4P35408 488 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 GARSP41250 739 aaKnown RBP9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 CXCR3P49682 368 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 TYRO3Q06418 890 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 CDK18Q07002 472 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 DNASE1L3Q13609 305 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 IL11RAQ14626 422 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 MEA1Q16626 185 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 UGP2Q16851 508 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 UGT8Q16880 541 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 DPCR1Q3MIW9 517 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 CBWD6Q4V339 395 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 CBWD3Q5JTY5 395 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 CBWD5Q5RIA9 395 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 ATXN7L2Q5T6C5 722 aaPredicted RBP9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 SLC6A19Q695T7 634 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 DENND1BQ6P3S1 775 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 SLC30A9Q6PML9 568 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 RASGRP3Q8IV61 690 aa9.04□□□□□ -0.96
VPS9D1-205ENST00000565452 NAGSQ8N159 534 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms