RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 FGF1P05230 155 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 CEACAM5P06731 702 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 DESP17661 470 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 ITIH1P19827 911 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 LHCGRP22888 699 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 AMPD1P23109 780 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 KELP23276 732 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 IL4RP24394 825 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 PCK1P35558 622 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 ETV5P41161 510 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 RENBPP51606 427 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 ZNF135P52742 658 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-213ENST00000565173 TYRO3Q06418 890 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 NR1D2Q14995 579 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 ACOX1Q15067 660 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 ASIC2Q16515 512 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 ZSCAN23Q3MJ62 389 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 TMCO4Q5TGY1 634 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 SPECC1LQ69YQ0 1117 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 TXNRD3NBQ6F5E7 133 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 HSD11B1LQ7Z5J1 315 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 SLITRK4Q8IW52 837 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 EXD3Q8N9H8 876 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 PTCD2Q8WV60 388 aaKnown RBP8.59□□□□□ -1.03
CAPN3-213ENST00000565173 MED8Q96G25 268 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 TMEM74Q96NL1 305 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 NAP1L5Q96NT1 182 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-213ENST00000565173 NUDCD1Q96RS6 583 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 MGME1Q9BQP7 344 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 FRMD8Q9BZ67 464 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-213ENST00000565173 SEMA6CQ9H3T2 930 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 DPEP2Q9H4A9 486 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 WDR26Q9H7D7 661 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 NOD2Q9HC29 1040 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 CYP4F12Q9HCS2 524 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 PPIL1Q9Y3C6 166 aa8.59□□□□□ -1.03
CAPN3-213ENST00000565173 UNC13CQ8NB66 2214 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 PRAMEF33A0A0G2JMD5 474 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 A0A0U1RQS6 177 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 A0A1W2PQC6 194 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 C9orf172C9J069 976 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 J3QKU1 62 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 PRAMEF10O60809 474 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 RARAP10276 462 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 MYCLP1P12525 358 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-213ENST00000565173 SKILP12757 684 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 KRT10P13645 584 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 CCNB1P14635 433 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 VIPR1P32241 457 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 ETV3P41162 512 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 POLD2P49005 469 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 OR1D5P58170 312 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 CDK3Q00526 305 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 TRAF2Q12933 501 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 IHHQ14623 411 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 SMTNL2Q2TAL5 461 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 LINC00303Q3SY05 128 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 ANO6Q4KMQ2 910 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 BOLA3Q53S33 107 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 CCDC183Q5T5S1 534 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 ZNF574Q6ZN55 896 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-213ENST00000565173 RFLNAQ6ZTI6 216 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 Q6ZVL8 140 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 ZNF438Q7Z4V0 828 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 TECPR1Q7Z6L1 1165 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 HEATR4Q86WZ0 1026 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 DTX1Q86Y01 620 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 TEX26Q8N6G2 289 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 TMEM159Q96B96 161 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 ZNF653Q96CK0 615 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 NUS1Q96E22 293 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 DTD2Q96FN9 168 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 SCRN2Q96FV2 425 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 CSPG4P5Q96PW8 444 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 BPIFA3Q9BQP9 254 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 ZWILCHQ9H900 591 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 CARS2Q9HA77 564 aaKnown RBP8.58□□□□□ -1.04
CAPN3-213ENST00000565173 TRNAU1APQ9NX07 287 aaKnown RBP8.58□□□□□ -1.04
CAPN3-213ENST00000565173 TMEM63CQ9P1W3 806 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 MYO1AQ9UBC5 1043 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 PISDQ9UG56 409 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 PHTF1Q9UMS5 762 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 SUFUQ9UMX1 484 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 SLC17A4Q9Y2C5 497 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 LOXL2Q9Y4K0 774 aa8.58□□□□□ -1.04
CAPN3-213ENST00000565173 AHCTF1Q8WYP5 2266 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 UBR5O95071 2799 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 MYO18BQ8IUG5 2567 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 A0A1B0GTH6 734 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 A0A1W2PQ67 120 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 NPIPB15A6NHN6 443 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 GOLGA6L22H0YM25 854 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 H3BRJ5 948 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 AGRPO00253 132 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 PDE2AO00408 941 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 FZD6O60353 706 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 PGLSO95336 258 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 ECEL1O95672 775 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 CPNE6O95741 557 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 SOD1P00441 154 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms