RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MRPS21P82921 87 aaKnown RBP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 MSLNQ13421 630 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 LAMB3Q13751 1172 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 SIM2Q14190 667 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 SLC29A2Q14542 456 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 STARD3Q14849 445 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 CRYMQ14894 314 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 CSRP2Q16527 193 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 FBXO43Q4G163 708 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 ZNF805Q5CZA5 627 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 SPANXN3Q5MJ09 141 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 ARMC3Q5W041 872 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 STEAP4Q687X5 459 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 PKN3Q6P5Z2 889 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 BRAT1Q6PJG6 821 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 CES3Q6UWW8 571 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 C3orf62Q6ZUJ4 267 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 GLT6D1Q7Z4J2 308 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 NDUFAF2Q8N183 169 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 TXNDC5Q8NBS9 432 aaKnown RBP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 TMIEQ8NEW7 156 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 GSDMBQ8TAX9 411 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 ZNF669Q96BR6 464 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 ERLEC1Q96DZ1 483 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 SMIM14Q96QK8 99 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 GABRG3Q99928 467 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 KIFC1Q9BW19 673 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 FUT8Q9BYC5 575 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 FAM126AQ9BYI3 521 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 CHRAC1Q9NRG0 131 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 ANGPTL2Q9UKU9 493 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 PHTF1Q9UMS5 762 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 PLAAQ9Y263 795 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 SPO11Q9Y5K1 396 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 RPS6KL1Q9Y6S9 549 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 A0A0J9YYE9 177 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 TSPAN11A1L157 253 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 CAPN8A6NHC0 703 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 C1QTNF9BB2RNN3 333 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 MAP2K7O14733 419 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 SASH3O75995 380 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 CRTAMO95727 393 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 TRBC1P01850 177 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 SLC4A1P02730 911 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 ALPIP09923 528 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 NUDT17P0C025 328 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 C1QTNF9P0C862 333 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 HOXB2P14652 356 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 XPAP23025 273 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-205ENST00000564899 NMBRP28336 390 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 STX2P32856 288 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 ABL2P42684 1182 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 PSMD8P48556 350 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 POLR2LP62875 67 aaKnown RBP11.11□□□□□ -0.63
SF3B3-205ENST00000564899 IFFO1Q0D2I5 559 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 CAMK2GQ13555 558 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-205ENST00000564899 CCINQ13939 588 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 POM121L1PQ3SYA9 428 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 ANKRD20A4Q4UJ75 823 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 ALS2CLQ60I27 953 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 USP45Q70EL2 814 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 NLRP9Q7RTR0 991 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 TMEM135Q86UB9 458 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 FAM160A2Q8N612 972 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-205ENST00000564899 IL17RCQ8NAC3 791 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.11□□□□□ -0.63
SF3B3-205ENST00000564899 PIP4K2CQ8TBX8 421 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 BRSK1Q8TDC3 778 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 SPOCK2Q92563 424 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 MFSD3Q96ES6 412 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 PPP1R16AQ96I34 528 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 RUFY1Q96T51 708 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 FAM129BQ96TA1 746 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 NELL2Q99435 816 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 VIPAS39Q9H9C1 493 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 PLAC1Q9HBJ0 212 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 POLR3BQ9NW08 1133 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-205ENST00000564899 HACD3Q9P035 362 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 DKK3Q9UBP4 350 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 SARDHQ9UL12 918 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 RAB23Q9ULC3 237 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 PPM1HQ9ULR3 514 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 MRPS17Q9Y2R5 130 aaKnown RBP11.11□□□□□ -0.63
SF3B3-205ENST00000564899 ZNF711Q9Y462 761 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 ARL5AQ9Y689 179 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 SPAG17Q6Q759 2223 aa11.11□□□□□ -0.63
SF3B3-205ENST00000564899 TCRBV9S1A1TA0A576 114 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 MROH6A6NGR9 719 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 C16orf96A6NNT2 1141 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 UPK3BL1B0FP48 263 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 UPK3BL2E5RIL1 263 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 AURKAO14965 403 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 LDB2O43679 373 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 RNASEH1O60930 286 aaKnown RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 ADAM23O75077 832 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 PAPSS2O95340 614 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 TOP3BO95985 862 aaKnown RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 IL1BP01584 269 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 SHBGP04278 402 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms