RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 CENPTQ96BT3 561 aa12.48□□□□□ -0.41
KARS-204ENST00000564578 LRRC1Q9BTT6 524 aa12.48□□□□□ -0.41
KARS-204ENST00000564578 CARD6Q9BX69 1037 aa12.48□□□□□ -0.41
KARS-204ENST00000564578 ZFYVE1Q9HBF4 777 aa12.48□□□□□ -0.41
KARS-204ENST00000564578 CASS4Q9NQ75 786 aa12.48□□□□□ -0.41
KARS-204ENST00000564578 ZNF711Q9Y462 761 aa12.48□□□□□ -0.41
KARS-204ENST00000564578 CTAGE15A4D2H0 777 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 FAM187AA6NFU0 413 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 RECQL5O94762 991 aaPredicted RBP12.47□□□□□ -0.41
KARS-204ENST00000564578 RHOBTB1O94844 696 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 C1SP09871 688 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 CTAGE8P0CG41 777 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 ZNF30P17039 623 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 NFKBIAP25963 317 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 CD27P26842 260 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 HMGCLP35914 325 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 ETV3P41162 512 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 TNNT3P45378 269 aaPredicted RBP12.47□□□□□ -0.41
KARS-204ENST00000564578 STC1P52823 247 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 WSCD2Q2TBF2 565 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 LYSMD4Q5XG99 296 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 DENND2CQ68D51 928 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 KDM7AQ6ZMT4 941 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 LINC00523Q86TU6 105 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 CTAGE6Q86UF2 777 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 CTAGE4Q8IX94 777 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 TTC30BQ8N4P2 665 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 TMEM145Q8NBT3 493 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 MNS1Q8NEH6 495 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 BLOC1S5Q8TDH9 187 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 ASB12Q8WXK4 309 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 PHOX2BQ99453 314 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 HINFPQ9BQA5 517 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 ERP44Q9BS26 406 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 FZD3Q9NPG1 666 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 PILRBQ9UKJ0 227 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 SMG5Q9UPR3 1016 aaKnown RBP12.47□□□□□ -0.41
KARS-204ENST00000564578 PSMD11O00231 422 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 DNALI1O14645 258 aaPredicted RBP12.47□□□□□ -0.41
KARS-204ENST00000564578 AVILO75366 819 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 RPL21P46778 160 aaKnown RBP12.47□□□□□ -0.41
KARS-204ENST00000564578 LMAN1P49257 510 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 CDH17Q12864 832 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 MTM1Q13496 603 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 ARHGEF7Q14155 803 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 TRADDQ15628 312 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 DNTTIP2Q5QJE6 756 aaKnown RBP12.47□□□□□ -0.41
KARS-204ENST00000564578 CERCAMQ5T4B2 595 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 DUPD1Q68J44 220 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 CAND1Q86VP6 1230 aaKnown RBP12.47□□□□□ -0.41
KARS-204ENST00000564578 PELI3Q8N2H9 469 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 CEP112Q8N8E3 955 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 BRSK1Q8TDC3 778 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 SNX19Q92543 992 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 LENG8Q96PV6 779 aaPredicted RBP12.47□□□□□ -0.41
KARS-204ENST00000564578 TRIM31Q9BZY9 425 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 TRABDQ9H4I3 376 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 MBNL1Q9NR56 388 aaKnown RBP12.47□□□□□ -0.41
KARS-204ENST00000564578 TPX2Q9ULW0 747 aaKnown RBP12.47□□□□□ -0.41
KARS-204ENST00000564578 CA5BQ9Y2D0 317 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 ARL5AQ9Y689 179 aa12.47□□□□□ -0.41
KARS-204ENST00000564578 CACNA1EQ15878 2313 aa12.46□□□□□ -0.41
KARS-204ENST00000564578 MEI4A8MW99 385 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 EFCAB8A8MWE9 144 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 H0Y8X5 98 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 LDB2O43679 373 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 BUD23O43709 281 aaKnown RBP12.46□□□□□ -0.42
KARS-204ENST00000564578 SEC31AO94979 1220 aaKnown RBP12.46□□□□□ -0.42
KARS-204ENST00000564578 SLC7A5Q01650 507 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 SGCGQ13326 291 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 PTPRCAPQ14761 206 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 ACOX1Q15067 660 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 SETMARQ53H47 684 aaPredicted RBP12.46□□□□□ -0.42
KARS-204ENST00000564578 PEAR1Q5VY43 1037 aaPredicted RBP12.46□□□□□ -0.42
KARS-204ENST00000564578 PPIL6Q8IXY8 311 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 DNAAF3Q8N9W5 541 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 TP53I13Q8NBR0 393 aaPredicted RBP12.46□□□□□ -0.42
KARS-204ENST00000564578 MCUQ8NE86 351 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 SCAMP4Q969E2 229 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 DTD2Q96FN9 168 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 SERAC1Q96JX3 654 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 SRPK1Q96SB4 655 aaKnown RBP12.46□□□□□ -0.42
KARS-204ENST00000564578 SEMA4AQ9H3S1 761 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 HACD3Q9P035 362 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 IL17CQ9P0M4 197 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 DMTF1Q9Y222 760 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 SNX24Q9Y343 169 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 KCTD3Q9Y597 815 aa12.46□□□□□ -0.42
KARS-204ENST00000564578 TNRC6BQ9UPQ9 1833 aaKnown RBP12.46□□□□□ -0.42
KARS-204ENST00000564578 ATXN2Q99700 1313 aaKnown RBP12.45□□□□□ -0.42
KARS-204ENST00000564578 POM121BA6NF01 834 aa12.45□□□□□ -0.42
KARS-204ENST00000564578 GOLGA8MH3BSY2 632 aa12.45□□□□□ -0.42
KARS-204ENST00000564578 LZTS3O60299 673 aaPredicted RBP12.45□□□□□ -0.42
KARS-204ENST00000564578 HNRNPA2B1P22626 353 aaKnown RBP12.45□□□□□ -0.42
KARS-204ENST00000564578 MAGEA3P43357 314 aa12.45□□□□□ -0.42
KARS-204ENST00000564578 SPINT3P49223 89 aa12.45□□□□□ -0.42
KARS-204ENST00000564578 CLDN2P57739 230 aa12.45□□□□□ -0.42
KARS-204ENST00000564578 NHLH1Q02575 133 aa12.45□□□□□ -0.42
KARS-204ENST00000564578 POU6F1Q14863 301 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms