RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 RFX8Q6ZV50 586 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 MCOLN2Q8IZK6 566 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 NPWQ8N729 165 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 ZDHHC1Q8WTX9 485 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 HTR3CQ8WXA8 447 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 COQ10AQ96MF6 247 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 PCMTD1Q96MG8 357 aaPredicted RBP14.11□□□□□ -0.15
CDR2-204ENST00000564542 PSKH2Q96QS6 385 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 GSDMCQ9BYG8 508 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 PHPT1Q9NRX4 125 aaPredicted RBP14.11□□□□□ -0.15
CDR2-204ENST00000564542 SPATS2LQ9NUQ6 558 aaKnown RBP14.11□□□□□ -0.15
CDR2-204ENST00000564542 B4GALT6Q9UBX8 382 aa14.11□□□□□ -0.15
CDR2-204ENST00000564542 PTPN13Q12923 2485 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 ARHGEF17Q96PE2 2063 aaPredicted RBP14.1□□□□□ -0.15
CDR2-204ENST00000564542 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.1□□□□□ -0.15
CDR2-204ENST00000564542 RHPN2P1A8MT19 583 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 LGALS16A8MUM7 142 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 A8MX80 341 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 DFFAO00273 331 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 DAPK3O43293 454 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 PPFIA2O75334 1257 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 FGF1P05230 155 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 PSMA2P25787 234 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 GPR3P46089 330 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 RENBPP51606 427 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 COPB1P53618 953 aaKnown RBP14.1□□□□□ -0.15
CDR2-204ENST00000564542 OR1D5P58170 312 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 CYP4F2P78329 520 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 CNGA3Q16281 694 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 ERMARDQ5T6L9 678 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 ACAD10Q6JQN1 1059 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 ZNF574Q6ZN55 896 aaPredicted RBP14.1□□□□□ -0.15
CDR2-204ENST00000564542 ARHGAP36Q6ZRI8 547 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 HEATR4Q86WZ0 1026 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 NRROSQ86YC3 692 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 NSMCE3Q96MG7 304 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 PEBP4Q96S96 227 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 KCTD15Q96SI1 283 aaPredicted RBP14.1□□□□□ -0.15
CDR2-204ENST00000564542 NUDT22Q9BRQ3 303 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 FUCA2Q9BTY2 467 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 SNRNP25Q9BV90 132 aaKnown RBP14.1□□□□□ -0.15
CDR2-204ENST00000564542 TEX101Q9BY14 249 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 FRMD8Q9BZ67 464 aaPredicted RBP14.1□□□□□ -0.15
CDR2-204ENST00000564542 TRNAU1APQ9NX07 287 aaKnown RBP14.1□□□□□ -0.15
CDR2-204ENST00000564542 KCTD5Q9NXV2 234 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 TAAR2Q9P1P5 351 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 SEPT3Q9UH03 358 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 PCDHGA3Q9Y5H0 932 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 SDK2Q58EX2 2172 aa14.1□□□□□ -0.15
CDR2-204ENST00000564542 IGHV5-10-1A0A0J9YXX1 117 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 A0A1W2PQ67 120 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 HTRA2O43464 458 aaPredicted RBP14.09□□□□□ -0.15
CDR2-204ENST00000564542 SOCS5O75159 536 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 ECEL1O95672 775 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 CEACAM5P06731 702 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 CCL4P13236 92 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 ERCC2P18074 760 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 ALDH4A1P30038 563 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 ATP1A2P50993 1020 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 CDK3Q00526 305 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 MAMLD1Q13495 774 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 TRA2AQ13595 282 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDR2-204ENST00000564542 PEX6Q13608 980 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 TMCO4Q5TGY1 634 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 PPP1R2P3Q6NXS1 205 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 RCBTB1Q8NDN9 531 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 ANKRD20A12PQ8NF67 263 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 DTD2Q96FN9 168 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 CCDC74BQ96LY2 380 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 ZNF599Q96NL3 588 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 TAAR9Q96RI9 348 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 SLC25A18Q9H1K4 315 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 SUDS3Q9H7L9 328 aaPredicted RBP14.09□□□□□ -0.15
CDR2-204ENST00000564542 PARVAQ9NVD7 372 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 FANCLQ9NW38 375 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 GEMIN8Q9NWZ8 242 aaKnown RBP14.09□□□□□ -0.15
CDR2-204ENST00000564542 SUFUQ9UMX1 484 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 COL12A1Q99715 3063 aa14.09□□□□□ -0.15
CDR2-204ENST00000564542 PSMD11O00231 422 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 HEXIM1O94992 359 aaKnown RBP14.08□□□□□ -0.16
CDR2-204ENST00000564542 CPP00450 1065 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 FUCA1P04066 466 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 CCDC172P0C7W6 258 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 FGF3P11487 239 aaPredicted RBP14.08□□□□□ -0.16
CDR2-204ENST00000564542 FERP16591 822 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 NFKBIAP25963 317 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 AK4P27144 223 aaPredicted RBP14.08□□□□□ -0.16
CDR2-204ENST00000564542 TEAD1P28347 426 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 CD1CP29017 333 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 VIPR1P32241 457 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 HSPA9P38646 679 aaKnown RBP14.08□□□□□ -0.16
CDR2-204ENST00000564542 ETV3P41162 512 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 GNPDA1P46926 289 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 HCAR3P49019 387 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 ARSDP51689 593 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 ZNF135P52742 658 aaPredicted RBP14.08□□□□□ -0.16
CDR2-204ENST00000564542 LIMK2P53671 638 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 UBXN1Q04323 297 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 SLC10A7Q0GE19 358 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 BIRC2Q13490 618 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms