RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PEX13Q92968 403 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 RAB7BQ96AH8 199 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 ERLEC1Q96DZ1 483 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 C19orf43Q9BQ61 176 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 IER2Q9BTL4 223 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 MKRN2Q9H000 416 aaKnown RBP12.94□□□□□ -0.34
SPG7-209ENST00000564047 CHRDQ9H2X0 955 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 POLMQ9NP87 494 aaPredicted RBP12.94□□□□□ -0.34
SPG7-209ENST00000564047 CHRAC1Q9NRG0 131 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 NINJ2Q9NZG7 142 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.94□□□□□ -0.34
SPG7-209ENST00000564047 RIMKLBQ9ULI2 386 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 SIT1Q9Y3P8 196 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 ZNF711Q9Y462 761 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 MYO18AQ92614 2054 aaKnown RBP12.93□□□□□ -0.34
SPG7-209ENST00000564047 MROH6A6NGR9 719 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 C2orf81A6NN90 581 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 GOLGA8KD6RF30 607 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 MID1O15344 667 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 LDB2O43679 373 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 SPAG6O75602 509 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 USP1O94782 785 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 DNTTP04053 509 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 PRKCGP05129 697 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 POLBP06746 335 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 PIRTP0C851 137 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 ADRB3P13945 408 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 VIPR1P32241 457 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 MAGEA9P43362 315 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 METAP1P53582 386 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 PDE1BQ01064 536 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 ELP6Q0PNE2 266 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 SFSWAPQ12872 951 aaKnown RBP12.93□□□□□ -0.34
SPG7-209ENST00000564047 SEPT6Q14141 434 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 CDKN3Q16667 212 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 KYNUQ16719 465 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 POM121L1PQ3SYA9 428 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 SPANXN3Q5MJ09 141 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 TSTD2Q5T7W7 516 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 STEAP4Q687X5 459 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 ERAP2Q6P179 960 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 GLT6D1Q7Z4J2 308 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 SPEM1Q8N4L4 309 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 TTC30BQ8N4P2 665 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 MDGA1Q8NFP4 955 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 FAM131CQ96AQ9 280 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 SIPA1Q96FS4 1042 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 MRGPRX1Q96LB2 322 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 SMIM14Q96QK8 99 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 SH3GL2Q99962 352 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 PABPC3Q9H361 631 aaKnown RBP12.93□□□□□ -0.34
SPG7-209ENST00000564047 LRRC4CQ9HCJ2 640 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 PCDH12Q9NPG4 1184 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 DLL3Q9NYJ7 618 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 VPS18Q9P253 973 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 ADAM21Q9UKJ8 722 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 RPS6KL1Q9Y6S9 549 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 CHD8Q9HCK8 2581 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 F5P12259 2224 aa12.93□□□□□ -0.34
SPG7-209ENST00000564047 TCRBV21S2A2A0A5A6 115 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 NPIPB15A6NHN6 443 aaPredicted RBP12.92□□□□□ -0.34
SPG7-209ENST00000564047 AGPSO00116 658 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 AURKAO14965 403 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 AREL1O15033 823 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 SLC7A4O43246 635 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 RIPK2O43353 540 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 PI15O43692 258 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 ZNF30P17039 623 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 GABRG2P18507 467 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 LPOP22079 712 aaPredicted RBP12.92□□□□□ -0.34
SPG7-209ENST00000564047 PSMA3P25788 255 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 PHBP35232 272 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 DRD3P35462 400 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 HMGCLP35914 325 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 P2RY2P41231 377 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 GPX6P59796 221 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 ACVR1Q04771 509 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 CNTN1Q12860 1018 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 FRG1Q14331 258 aaKnown RBP12.92□□□□□ -0.34
SPG7-209ENST00000564047 PTPRRQ15256 657 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 SKIDA1Q1XH10 827 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 TTC31Q49AM3 519 aaPredicted RBP12.92□□□□□ -0.34
SPG7-209ENST00000564047 ANKRD20A4Q4UJ75 823 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 PIP5KL1Q5T9C9 394 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 ZC3H14Q6PJT7 736 aaKnown RBP12.92□□□□□ -0.34
SPG7-209ENST00000564047 CRTC1Q6UUV9 634 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 UNC5AQ6ZN44 842 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 C3orf62Q6ZUJ4 267 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 USP30Q70CQ3 517 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 CYS1Q717R9 158 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 DPPA4Q7L190 304 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 LYSMD3Q7Z3D4 306 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 FANCMQ8IYD8 2048 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 HDDC3Q8N4P3 179 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 AADATQ8N5Z0 425 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 STYXQ8WUJ0 223 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 CFAP36Q96G28 342 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 GPR63Q9BZJ6 419 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 ZFYVE1Q9HBF4 777 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 PLAC1Q9HBJ0 212 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms