RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ITIH2P19823 946 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 MPSTP25325 297 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 CD1CP29017 333 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 TSPAN7P41732 249 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 LIMK2P53671 638 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 SLC20A2Q08357 652 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 NME3Q13232 169 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 TRA2AQ13595 282 aaKnown RBP eCLIP15.99■□□□□ 0.15
RNF40-205ENST00000563909 INPP5AQ14642 412 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 CLPPQ16740 277 aaPredicted RBP15.99■□□□□ 0.15
RNF40-205ENST00000563909 CLEC16AQ2KHT3 1053 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 EFHC1Q5JVL4 640 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 NAA35Q5VZE5 725 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 HGSNATQ68CP4 663 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 TIPARPQ7Z3E1 657 aaKnown RBP15.99■□□□□ 0.15
RNF40-205ENST00000563909 ZNF571Q7Z3V5 609 aaPredicted RBP15.99■□□□□ 0.15
RNF40-205ENST00000563909 TFAP2DQ7Z6R9 452 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 ATL2Q8NHH9 583 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 CPA5Q8WXQ8 436 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 PDXPQ96GD0 296 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 WDR92Q96MX6 357 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 CPXM1Q96SM3 734 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 PCDHB18PQ96TA0 734 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 SYT11Q9BT88 431 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 SPRY4Q9C004 299 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 IMPACTQ9P2X3 320 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 TLK1Q9UKI8 766 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 MAP4K5Q9Y4K4 846 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 DGKBQ9Y6T7 804 aa15.99■□□□□ 0.15
RNF40-205ENST00000563909 HIVEP3Q5T1R4 2406 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 RHPN2P1A8MT19 583 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 GOLGA6L6A8MZA4 724 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 KRIT1O00522 736 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 HSF2BPO75031 334 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 GRAP2O75791 330 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 ZMPSTE24O75844 475 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 PDGFAP04085 211 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 UGT2B4P06133 528 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 NSFP46459 744 aaKnown RBP15.98■□□□□ 0.15
RNF40-205ENST00000563909 GABRB2P47870 512 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 RAB15P59190 212 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 MRPL49Q13405 166 aaKnown RBP15.98■□□□□ 0.15
RNF40-205ENST00000563909 WSCD2Q2TBF2 565 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 PTPN20Q4JDL3 420 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 CRTC2Q53ET0 693 aaPredicted RBP15.98■□□□□ 0.15
RNF40-205ENST00000563909 ZDHHC17Q8IUH5 632 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 C18orf8Q96DM3 657 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 KLHL32Q96NJ5 620 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 CTRCQ99895 268 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 ASNSD1Q9NWL6 643 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 DKK3Q9UBP4 350 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 ACTL7AQ9Y615 435 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 HIVEP1P15822 2718 aa15.98■□□□□ 0.15
RNF40-205ENST00000563909 TCP11X1B4DZS4 312 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 ZW10O43264 779 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 OR1E1P30953 314 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 MAZP56270 477 aaKnown RBP15.97■□□□□ 0.15
RNF40-205ENST00000563909 ABHD18Q0P651 414 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 NKAIN2Q5VXU1 208 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 ACAD10Q6JQN1 1059 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 WDR59Q6PJI9 974 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 TC2NQ8N9U0 490 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 OR4D9Q8NGE8 314 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 OR1E3Q8WZA6 343 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 RTP4Q96DX8 246 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 TCTN2Q96GX1 697 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 TEFMQ96QE5 360 aaKnown RBP15.97■□□□□ 0.15
RNF40-205ENST00000563909 TMEM168Q9H0V1 697 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 ATP13A1Q9HD20 1204 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 MPP6Q9NZW5 540 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 ERRFI1Q9UJM3 462 aaPredicted RBP15.97■□□□□ 0.15
RNF40-205ENST00000563909 COQ6Q9Y2Z9 468 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 SNX10Q9Y5X0 201 aa15.97■□□□□ 0.15
RNF40-205ENST00000563909 MRPS18BQ9Y676 258 aaKnown RBP15.97■□□□□ 0.15
RNF40-205ENST00000563909 LRP4O75096 1905 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 RFPL1O75677 317 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 LDLRP01130 860 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 ERBB2P04626 1255 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 GZMAP12544 262 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 TIMP2P16035 220 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 MMP8P22894 467 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 ARF5P84085 180 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 ZNF438Q7Z4V0 828 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 ZC3H18Q86VM9 953 aaKnown RBP15.96■□□□□ 0.15
RNF40-205ENST00000563909 PHF13Q86YI8 300 aaPredicted RBP15.96■□□□□ 0.15
RNF40-205ENST00000563909 PLPP6Q8IY26 295 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 CCL4L1Q8NHW4 92 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 SLC30A5Q8TAD4 765 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 KIAA1524Q8TCG1 905 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 PDCD6IPQ8WUM4 868 aaKnown RBP15.96■□□□□ 0.15
RNF40-205ENST00000563909 CYP4F12Q9HCS2 524 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 MRPL40Q9NQ50 206 aaKnown RBP15.96■□□□□ 0.15
RNF40-205ENST00000563909 ADAM22Q9P0K1 906 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 PCDHB3Q9Y5E6 796 aa15.96■□□□□ 0.15
RNF40-205ENST00000563909 CSMD2Q7Z408 3487 aa15.95■□□□□ 0.14
RNF40-205ENST00000563909 SSU72P8A0A1W2PR75 194 aa15.95■□□□□ 0.14
RNF40-205ENST00000563909 ILVBLA1L0T0 632 aa15.95■□□□□ 0.14
RNF40-205ENST00000563909 TMEM202A6NGA9 273 aa15.95■□□□□ 0.14
RNF40-205ENST00000563909 DDX3XO00571 662 aaKnown RBP eCLIP15.95■□□□□ 0.146e-9■■□□□ 13.9
RNF40-205ENST00000563909 CALB1P05937 261 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms