RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CYP4F2P78329 520 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 IL10RBQ08334 325 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 PEX6Q13608 980 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 ZNF574Q6ZN55 896 aaPredicted RBP18.69■□□□□ 0.58
NME3-204ENST00000563498 NRROSQ86YC3 692 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 PELI3Q8N2H9 469 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 ZDHHC1Q8WTX9 485 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 PSKH2Q96QS6 385 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 TAAR9Q96RI9 348 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 AGPAT1Q99943 283 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 TEX101Q9BY14 249 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 CARS2Q9HA77 564 aaKnown RBP18.69■□□□□ 0.58
NME3-204ENST00000563498 SP110Q9HB58 689 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 PHPT1Q9NRX4 125 aaPredicted RBP18.69■□□□□ 0.58
NME3-204ENST00000563498 SEPT11Q9NVA2 429 aaKnown RBP18.69■□□□□ 0.58
NME3-204ENST00000563498 IGHV5-10-1A0A0J9YXX1 117 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.68■□□□□ 0.58
NME3-204ENST00000563498 A0A1W2PQ67 120 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 TEX33O43247 280 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 CEACAM5P06731 702 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 CCL4P13236 92 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 CD1CP29017 333 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 ALDH4A1P30038 563 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 SCNN1BP51168 640 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 OGDHQ02218 1023 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 SQSTM1Q13501 440 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 TRA2AQ13595 282 aaKnown RBP eCLIP18.68■□□□□ 0.58
NME3-204ENST00000563498 AMZ1Q400G9 498 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 RFX8Q6ZV50 586 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 ARHGAP12Q8IWW6 846 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 MCOLN2Q8IZK6 566 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 NUS1Q96E22 293 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 NUDT22Q9BRQ3 303 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 SLC12A9Q9BXP2 914 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 DHX35Q9H5Z1 703 aaKnown RBP18.68■□□□□ 0.58
NME3-204ENST00000563498 GPATCH2LQ9NWQ4 482 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 TAAR2Q9P1P5 351 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 B4GALT6Q9UBX8 382 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 SEPT3Q9UH03 358 aa18.68■□□□□ 0.58
NME3-204ENST00000563498 PTPN13Q12923 2485 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 ARHGEF17Q96PE2 2063 aaPredicted RBP18.67■□□□□ 0.58
NME3-204ENST00000563498 SOCS5O75159 536 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 FGF3P11487 239 aaPredicted RBP18.67■□□□□ 0.58
NME3-204ENST00000563498 LIMK2P53671 638 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 CLCA4Q14CN2 919 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 CA9Q16790 459 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 ERMARDQ5T6L9 678 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 ACAD10Q6JQN1 1059 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 HEATR4Q86WZ0 1026 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 CCDC112Q8NEF3 446 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 NEK11Q8NG66 645 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 OR4D9Q8NGE8 314 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 NKD1Q969G9 470 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 CCDC74BQ96LY2 380 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 ZNF599Q96NL3 588 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 DPYSL5Q9BPU6 564 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 FRMD8Q9BZ67 464 aaPredicted RBP18.67■□□□□ 0.58
NME3-204ENST00000563498 CDH19Q9H159 772 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 BSNQ9UPA5 3926 aa18.67■□□□□ 0.58
NME3-204ENST00000563498 A8MX80 341 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 DFFAO00273 331 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 DAPK3O43293 454 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 HTRA2O43464 458 aaPredicted RBP18.66■□□□□ 0.58
NME3-204ENST00000563498 HEXIM1O94992 359 aaKnown RBP18.66■□□□□ 0.58
NME3-204ENST00000563498 ECEL1O95672 775 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 FUCA1P04066 466 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 ERCC2P18074 760 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 NFKBIAP25963 317 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 TEAD1P28347 426 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 HCAR3P49019 387 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 ARSDP51689 593 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 ZNF135P52742 658 aaPredicted RBP18.66■□□□□ 0.58
NME3-204ENST00000563498 CDK3Q00526 305 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 CNGA3Q16281 694 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 PPP1R2P3Q6NXS1 205 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 BORAQ6PGQ7 559 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 ARHGAP36Q6ZRI8 547 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 PSTKQ8IV42 348 aaKnown RBP18.66■□□□□ 0.58
NME3-204ENST00000563498 CBARPQ8N350 705 aaPredicted RBP18.66■□□□□ 0.58
NME3-204ENST00000563498 NPWQ8N729 165 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 AGBL5Q8NDL9 886 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 RCBTB1Q8NDN9 531 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 NSMCE3Q96MG7 304 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 DDA1Q9BW61 102 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 SUFUQ9UMX1 484 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 SLC17A4Q9Y2C5 497 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 SDK2Q58EX2 2172 aa18.66■□□□□ 0.58
NME3-204ENST00000563498 PSMD11O00231 422 aa18.65■□□□□ 0.58
NME3-204ENST00000563498 CCDC172P0C7W6 258 aa18.65■□□□□ 0.58
NME3-204ENST00000563498 PSMA2P25787 234 aa18.65■□□□□ 0.58
NME3-204ENST00000563498 VIPR1P32241 457 aa18.65■□□□□ 0.58
NME3-204ENST00000563498 HSPA9P38646 679 aaKnown RBP18.65■□□□□ 0.58
NME3-204ENST00000563498 GNPDA1P46926 289 aa18.65■□□□□ 0.58
NME3-204ENST00000563498 SRSF1Q07955 248 aaKnown RBP eCLIP18.65■□□□□ 0.58
NME3-204ENST00000563498 BIRC2Q13490 618 aa18.65■□□□□ 0.58
NME3-204ENST00000563498 MAMLD1Q13495 774 aa18.65■□□□□ 0.58
NME3-204ENST00000563498 LBRQ14739 615 aaKnown RBP18.65■□□□□ 0.58
NME3-204ENST00000563498 TMCO4Q5TGY1 634 aa18.65■□□□□ 0.58
NME3-204ENST00000563498 NAGSQ8N159 534 aa18.65■□□□□ 0.58
NME3-204ENST00000563498 LZTR1Q8N653 840 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms