RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 HEXIM1O94992 359 aaKnown RBP6.91□□□□□ -1.3
CDH11-208ENST00000563492 FGF1P05230 155 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 CEACAM5P06731 702 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 ITGA2BP08514 1039 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 CCDC172P0C7W6 258 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 GZMAP12544 262 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 CCL4P13236 92 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 MPSTP25325 297 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 HTR7P34969 479 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 PRKCIP41743 596 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 GNPDA1P46926 289 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 KIAA1024LP59773 190 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 AP1S1P61966 158 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 CYP4F2P78329 520 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 B4GALNT1Q00973 533 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 ZFP36L1Q07352 338 aaKnown RBP6.91□□□□□ -1.3
CDH11-208ENST00000563492 HLTFQ14527 1009 aaKnown RBP eCLIP6.91□□□□□ -1.3
CDH11-208ENST00000563492 GRM3Q14832 879 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 C16orf72Q14CZ0 275 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 IQCB1Q15051 598 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 DPYSL2Q16555 572 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 AMZ1Q400G9 498 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 C14orf28Q4W4Y0 310 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 CERCAMQ5T4B2 595 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 TMCO4Q5TGY1 634 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 NKAIN2Q5VXU1 208 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 SPECC1LQ69YQ0 1117 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 CAVIN1Q6NZI2 390 aaKnown RBP6.91□□□□□ -1.3
CDH11-208ENST00000563492 INO80CQ6PI98 192 aaPredicted RBP6.91□□□□□ -1.3
CDH11-208ENST00000563492 ZNF574Q6ZN55 896 aaPredicted RBP6.91□□□□□ -1.3
CDH11-208ENST00000563492 SPRED1Q7Z699 444 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 ZNF605Q86T29 641 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 TRIM74Q86UV6 250 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 VASH2Q86V25 355 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 HEATR4Q86WZ0 1026 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 ARL14Q8N4G2 192 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 EXD3Q8N9H8 876 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 CPLX3Q8WVH0 158 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 JPH3Q8WXH2 748 aaPredicted RBP6.91□□□□□ -1.3
CDH11-208ENST00000563492 SCAMP4Q969E2 229 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 PMEPA1Q969W9 287 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 LIN37Q96GY3 246 aaPredicted RBP6.91□□□□□ -1.3
CDH11-208ENST00000563492 AGAP2Q99490 1192 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 NUDT22Q9BRQ3 303 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 DPH1Q9BZG8 443 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 THAP2Q9H0W7 228 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 ISCUQ9H1K1 167 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 WDR26Q9H7D7 661 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 CARS2Q9HA77 564 aaKnown RBP6.91□□□□□ -1.3
CDH11-208ENST00000563492 PCDH18Q9HCL0 1135 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 FOXJ2Q9P0K8 574 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 CD84Q9UIB8 345 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 MYO6Q9UM54 1294 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 TMEM98Q9Y2Y6 226 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 LOXL2Q9Y4K0 774 aa6.91□□□□□ -1.3
CDH11-208ENST00000563492 PCYT1BQ9Y5K3 369 aaPredicted RBP6.91□□□□□ -1.3
CDH11-208ENST00000563492 SHROOM3Q8TF72 1996 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 A0A087X0T9 212 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 PRAMEF33A0A0G2JMD5 474 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 A0A1W2PQC6 194 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 PRSS38A1L453 326 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 GOLGA6CA6NDK9 693 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 GOLGA6BA6NDN3 693 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 EIF3CLB5ME19 914 aaKnown RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 C9orf172C9J069 976 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 H3BRJ5 948 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 ERVH48-1M5A8F1 160 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 TNFRSF10CO14798 259 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 PPM1DO15297 605 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 PRAMEF10O60809 474 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 PGLSO95336 258 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 ECEL1O95672 775 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 EML2O95834 649 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 SOD1P00441 154 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 CPP00450 1065 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 HOXC4P09017 264 aaPredicted RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 FAM228BP0C875 321 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 GOLGA6DP0CG33 693 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 CCNB1P14635 433 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 GLB1P16278 677 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 ALDH4A1P30038 563 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 CCKBRP32239 447 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 VIPR1P32241 457 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 PCK1P35558 622 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 ZNF165P49910 485 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 ARSDP51689 593 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 MAPK10P53779 464 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 TAS2R40P59535 323 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 POLR2LP62875 67 aaKnown RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 CTBSQ01459 385 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 RHDQ02161 417 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 DSC2Q02487 901 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 SLC25A11Q02978 314 aaKnown RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 ZNF235Q14590 738 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 RFTN1Q14699 578 aaPredicted RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 LINC00303Q3SY05 128 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 PHF19Q5T6S3 580 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 DOK6Q6PKX4 331 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 SLC30A9Q6PML9 568 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 TMCO3Q6UWJ1 677 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms