RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 KLF8O95600 359 aaPredicted RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 IL1BP01584 269 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 LHCGRP22888 699 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 ITGB7P26010 798 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 NTSR1P30989 418 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 PDE1BQ01064 536 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 GPS2Q13227 327 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 CCINQ13939 588 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 RASA2Q15283 850 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 TMED2Q15363 201 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 AGBL2Q5U5Z8 902 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 MMAAQ8IVH4 418 aaKnown RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 RIBC1Q8N443 379 aaPredicted RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 GOLGA6L1Q8N7Z2 621 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 TXNDC5Q8NBS9 432 aaKnown RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 CDKL2Q92772 493 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 PGM2Q96G03 612 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 CDKN2AIPNLQ96HQ2 116 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 ATP6V1G3Q96LB4 118 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 SRPK1Q96SB4 655 aaKnown RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 GPR63Q9BZJ6 419 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 ZFYVE1Q9HBF4 777 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 MED4Q9NPJ6 270 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 ZFATQ9P243 1243 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 BCCIPQ9P287 314 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMG1-208ENST00000563448 PSMC3IPQ9P2W1 217 aaPredicted RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 B4GALT6Q9UBX8 382 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 CA14Q9ULX7 337 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 SORCS3Q9UPU3 1222 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 C1orf232A0A0U1RR37 186 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 CCDC162PA2VCL2 907 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 STX7O15400 261 aaKnown RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 SLC7A4O43246 635 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 RNF40O75150 1001 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 GOT2P00505 430 aaKnown RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 COL9A1P20849 921 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 HMGCLP35914 325 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 COPAP53621 1224 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 MRPS21P82921 87 aaKnown RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 PTSQ03393 145 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 NAB1Q13506 487 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 HSP90B2PQ58FF3 399 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 KCTD16Q68DU8 428 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 KIAA1211LQ6NV74 962 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 PACS1Q6VY07 963 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 USP45Q70EL2 814 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 PTAR1Q7Z6K3 402 aaPredicted RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 TTC7BQ86TV6 843 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 SLC26A11Q86WA9 606 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 CNTN4Q8IWV2 1026 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 MZB1Q8WU39 189 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 TLCD1Q96CP7 247 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 RSPH9Q9H1X1 276 aaPredicted RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 MFSD1Q9H3U5 465 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 PCDH12Q9NPG4 1184 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 FKBPLQ9UIM3 349 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 ZNF180Q9UJW8 692 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 NOVA2Q9UNW9 492 aaKnown RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 C1QTNF3-AMACRE9PGA6 284 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 PLK4O00444 970 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 MAN2B1O00754 1011 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 SYNCRIPO60506 623 aaKnown RBP10.16□□□□□ -0.78
SMG1-208ENST00000563448 INHBAP08476 426 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 CYP2A6P11509 494 aaPredicted RBP10.16□□□□□ -0.78
SMG1-208ENST00000563448 VIPR1P32241 457 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 PSMD8P48556 350 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 PRAMEP78395 509 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 SATB1Q01826 763 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 RALGDSQ12967 914 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 CTBP1Q13363 440 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 PEX6Q13608 980 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 THOC5Q13769 683 aaKnown RBP10.16□□□□□ -0.78
SMG1-208ENST00000563448 LRRC66Q68CR7 880 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 SDE2Q6IQ49 451 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 DSG4Q86SJ6 1040 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 DENND6AQ8IWF6 608 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 OR6P1Q8NGX9 317 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 MCMBPQ9BTE3 642 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 CD248Q9HCU0 757 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 NDRG2Q9UN36 371 aaKnown RBP10.16□□□□□ -0.78
SMG1-208ENST00000563448 IKBKGQ9Y6K9 419 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 NUMA1Q14980 2115 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 A0A1W2PQF6 199 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 HMX2A2RU54 273 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 KRBA1A5PL33 1030 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 H7C0S8 307 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 SPINT1O43278 529 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 C1SP09871 688 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 PRSS56P0CW18 603 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 HOXB2P14652 356 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 GABRB3P28472 473 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 OAS2P29728 719 aaKnown RBP10.16□□□□□ -0.78
SMG1-208ENST00000563448 SLC1A2P43004 574 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 XIAPP98170 497 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 MPP1Q00013 466 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 PRKCQQ04759 706 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 SEMA3AQ14563 771 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 FBXO43Q4G163 708 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 NEPROQ6NW34 567 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 DPPA4Q7L190 304 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms