RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 KRCC1Q9NPI7 259 aaPredicted RBP5.18□□□□□ -1.58
LINC00254-201ENST00000563416 SIRT3Q9NTG7 399 aaPredicted RBP5.18□□□□□ -1.58
LINC00254-201ENST00000563416 DHDHQ9UQ10 334 aa5.18□□□□□ -1.58
LINC00254-201ENST00000563416 DERAQ9Y315 318 aa5.18□□□□□ -1.58
LINC00254-201ENST00000563416 RAP2CQ9Y3L5 183 aa5.18□□□□□ -1.58
LINC00254-201ENST00000563416 ITIH6Q6UXX5 1313 aa5.18□□□□□ -1.58
LINC00254-201ENST00000563416 SALL1Q9NSC2 1324 aa5.18□□□□□ -1.58
LINC00254-201ENST00000563416 STRNO43815 780 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 SURF6O75683 361 aaKnown RBP5.17□□□□□ -1.58
LINC00254-201ENST00000563416 ALPLP05186 524 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 CSF1P09603 554 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 LYL1P12980 280 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 HOXB2P14652 356 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 ADORA1P30542 326 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 TNFSF8P32971 234 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 PAPOLAP51003 745 aaKnown RBP5.17□□□□□ -1.58
LINC00254-201ENST00000563416 TIMM10P62072 90 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 G3BP1Q13283 466 aaKnown RBP eCLIP5.17□□□□□ -1.58
LINC00254-201ENST00000563416 CTXN3Q4LDR2 81 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 FAAH2Q6GMR7 532 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 SLC16A12Q6ZSM3 486 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 MOGAT3Q86VF5 341 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 BRSK2Q8IWQ3 736 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 PELI3Q8N2H9 469 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 LRRC57Q8N9N7 239 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 C2CD4CQ8TF44 421 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 TBC1D22AQ8WUA7 517 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 FAR1Q8WVX9 515 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 NCSTNQ92542 709 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 INPP5DQ92835 1189 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 LYZL4Q96KX0 146 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 TEFMQ96QE5 360 aaKnown RBP5.17□□□□□ -1.58
LINC00254-201ENST00000563416 SEC62Q99442 399 aaKnown RBP5.17□□□□□ -1.58
LINC00254-201ENST00000563416 ACAD9Q9H845 621 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 NOD2Q9HC29 1040 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 HIF1ANQ9NWT6 349 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 ZDHHC7Q9NXF8 308 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 GGA3Q9NZ52 723 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 SUFUQ9UMX1 484 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 LAMA4Q16363 1823 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 MGAMO43451 1857 aa5.17□□□□□ -1.58
LINC00254-201ENST00000563416 ASTN2O75129 1339 aaPredicted RBP5.17□□□□□ -1.58
LINC00254-201ENST00000563416 CNTNAP1P78357 1384 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 RFX7Q2KHR2 1363 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 SSC5DA1L4H1 1573 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 CASP8AP2Q9UKL3 1982 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 PARP14Q460N5 1801 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 EIF3FO00303 357 aaPredicted RBP5.16□□□□□ -1.58
LINC00254-201ENST00000563416 TNFRSF13BO14836 293 aaPredicted RBP5.16□□□□□ -1.58
LINC00254-201ENST00000563416 IKBKBO14920 756 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 HMMRO75330 724 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 CYP1A2P05177 515 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 MYZAPP0CAP1 466 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 ITGB6P18564 788 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 RFX2P48378 723 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 HTR6P50406 440 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 CLCNKBP51801 687 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 ZNF484Q5JVG2 852 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 CST9Q5W186 159 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 RETSATQ6NUM9 610 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 PDXDC1Q6P996 788 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 C1orf122Q6ZSJ8 110 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 ERC1Q8IUD2 1116 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 APOBEC3FQ8IUX4 373 aaKnown RBP5.16□□□□□ -1.58
LINC00254-201ENST00000563416 SCAIQ8N9R8 606 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 KDM1BQ8NB78 822 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 GABPB2Q8TAK5 448 aaPredicted RBP5.16□□□□□ -1.58
LINC00254-201ENST00000563416 HDAC7Q8WUI4 952 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 NEUROD6Q96NK8 337 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 PPP1R10Q96QC0 940 aaKnown RBP5.16□□□□□ -1.58
LINC00254-201ENST00000563416 WDR77Q9BQA1 342 aaPredicted RBP5.16□□□□□ -1.58
LINC00254-201ENST00000563416 GLIS2Q9BZE0 524 aaPredicted RBP5.16□□□□□ -1.58
LINC00254-201ENST00000563416 NCKIPSDQ9NZQ3 722 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 UPB1Q9UBR1 384 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 DBNLQ9UJU6 430 aaKnown RBP5.16□□□□□ -1.58
LINC00254-201ENST00000563416 OSGIN2Q9Y236 505 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 CRYL1Q9Y2S2 319 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 MYH4Q9Y623 1939 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 LOC285556D6RIA3 1793 aa5.16□□□□□ -1.58
LINC00254-201ENST00000563416 RPAP1Q9BWH6 1393 aaPredicted RBP5.16□□□□□ -1.58
LINC00254-201ENST00000563416 GREB1LQ9C091 1923 aaPredicted RBP5.15□□□□□ -1.58
LINC00254-201ENST00000563416 C17orf102A2RUQ5 167 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 HBP1O60381 514 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 FRAT2O75474 233 aaPredicted RBP5.15□□□□□ -1.59
LINC00254-201ENST00000563416 BAIAP3O94812 1187 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 PYGLP06737 847 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 UNGP13051 313 aaPredicted RBP5.15□□□□□ -1.59
LINC00254-201ENST00000563416 ARSAP15289 507 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 ARSBP15848 533 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 CHRNB2P17787 502 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 RXRAP19793 462 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 AVPR2P30518 371 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 CDKN2AP42771 156 aaKnown RBP5.15□□□□□ -1.59
LINC00254-201ENST00000563416 MVDP53602 400 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 ARHGAP8P85298 464 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 MPP1Q00013 466 aa5.15□□□□□ -1.59
LINC00254-201ENST00000563416 POU5F1Q01860 360 aaKnown RBP5.15□□□□□ -1.59
LINC00254-201ENST00000563416 ROR2Q01974 943 aaKnown RBP5.15□□□□□ -1.59
LINC00254-201ENST00000563416 BYSLQ13895 437 aaKnown RBP5.15□□□□□ -1.59
LINC00254-201ENST00000563416 GPR18Q14330 331 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms