RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CLDN7O95471 211 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 PTMAP06454 111 aaKnown RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 C1SP09871 688 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 ATXN1LP0C7T5 689 aaKnown RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 CYP2A6P11509 494 aaPredicted RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 CSRP1P21291 193 aaKnown RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 EPHA8P29322 1005 aaPredicted RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 TRIM23P36406 574 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 ETV3P41162 512 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 RABIFP47224 123 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 CCT8P50990 548 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 STC1P52823 247 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 GDF10P55107 478 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 WNT3AP56704 352 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 CDK18Q07002 472 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 EIF2B5Q13144 721 aaKnown RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 GALNT3Q14435 633 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 INPP5AQ14642 412 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 ACOX1Q15067 660 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 OASLQ15646 514 aaKnown RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 PCSK7Q16549 785 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 ZNF542PQ5EBM4 170 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 ANKRD20A2Q5SQ80 823 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 ANKRD20A1Q5TYW2 823 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 ANKRD20A3Q5VUR7 823 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 LRRC66Q68CR7 880 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 KCTD16Q68DU8 428 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 DARS2Q6PI48 645 aaKnown RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 Q6ZVL8 140 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 USP45Q70EL2 814 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 KDELC2Q7Z4H8 507 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 PTAR1Q7Z6K3 402 aaPredicted RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 GATAD2AQ86YP4 633 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 DCP2Q8IU60 420 aaKnown RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 KLHDC8BQ8IXV7 354 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 SLC25A45Q8N413 288 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 PAF1Q8N7H5 531 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 FAM71DQ8N9W8 422 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 TTC13Q8NBP0 860 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 DEFB124Q8NES8 71 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 BAHD1Q8TBE0 780 aaPredicted RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 CCDC110Q8TBZ0 833 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 ATG4AQ8WYN0 398 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 DTD2Q96FN9 168 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 MRGPRX2Q96LB1 330 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 SPATA13Q96N96 652 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 WDR24Q96S15 920 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 MLPHQ9BV36 600 aaPredicted RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 C1QTNF7Q9BXJ2 289 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 GBA3Q9H227 469 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 TRMT1Q9NXH9 659 aaKnown RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 KLHL8Q9P2G9 620 aaPredicted RBP8.55□□□□□ -1.04
UBR1-204ENST00000563239 FAM153AQ9UHL3 310 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 DNPEPQ9ULA0 475 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 SPO11Q9Y5K1 396 aa8.55□□□□□ -1.04
UBR1-204ENST00000563239 GOLGA6L9A6NEM1 432 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 TOR1BO14657 336 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 ENC1O14682 589 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 ZSCAN12O43309 604 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 LIASO43766 372 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 GCATO75600 419 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 NDST3O95803 873 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 SOD1P00441 154 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 EPOP01588 193 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 PCCBP05166 539 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 PIRTP0C851 137 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 GIMD1P0DJR0 217 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 CA4P22748 312 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 PSMB4P28070 264 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 CXCR5P32302 372 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 ADRA1AP35348 466 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 CHRNA4P43681 627 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 EPHB1P54762 984 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 YPEL5P62699 121 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 MTM1Q13496 603 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 OLIG2Q13516 323 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 PDE1CQ14123 709 aaPredicted RBP8.54□□□□□ -1.04
UBR1-204ENST00000563239 SIRPB2Q5JXA9 342 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 SEL1L2Q5TEA6 688 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 DENND2CQ68D51 928 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 ESRP1Q6NXG1 681 aaKnown RBP8.54□□□□□ -1.04
UBR1-204ENST00000563239 PNCKQ6P2M8 343 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 DGLUCYQ7Z3D6 616 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 NAXDQ8IW45 347 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 SLC35F6Q8N357 371 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 C1orf54Q8WWF1 131 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 ANP32BQ92688 251 aaKnown RBP8.54□□□□□ -1.04
UBR1-204ENST00000563239 RTP4Q96DX8 246 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 NUS1Q96E22 293 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 IFT43Q96FT9 208 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 AGAP2Q99490 1192 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 TMEM121Q9BTD3 319 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 APOOQ9BUR5 198 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 LGR4Q9BXB1 951 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 ADGRE3Q9BY15 652 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 ABCG8Q9H221 673 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 TCEAL2Q9H3H9 227 aaPredicted RBP8.54□□□□□ -1.04
UBR1-204ENST00000563239 UCKL1Q9NWZ5 548 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 RSPH14Q9UHP6 348 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 PCOLCE2Q9UKZ9 415 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms