RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ATXN2Q99700 1313 aaKnown RBP18.07■□□□□ 0.48
COMMD4-208ENST00000563220 TNRC18O15417 2968 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-208ENST00000563220 STX7O15400 261 aaKnown RBP18.06■□□□□ 0.48
COMMD4-208ENST00000563220 MPOP05164 745 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 HNF1BP35680 557 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 SERPINB4P48594 390 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 IRF9Q00978 393 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 CDKN3Q16667 212 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 RBM20Q5T481 1227 aaKnown RBP18.06■□□□□ 0.48
COMMD4-208ENST00000563220 N4BP2L1Q5TBK1 243 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-208ENST00000563220 PARM1Q6UWI2 310 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 CEP97Q8IW35 865 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 PLPP6Q8IY26 295 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 ZNF75CPQ92670 426 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-208ENST00000563220 KXD1Q9BQD3 176 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 RPP25Q9BUL9 199 aaKnown RBP18.06■□□□□ 0.48
COMMD4-208ENST00000563220 CATSPERZQ9NTU4 200 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 ELOVL2Q9NXB9 296 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 IL17CQ9P0M4 197 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 FKBPLQ9UIM3 349 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 MTCH2Q9Y6C9 303 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 ANKRD36A6QL64 1941 aa18.06■□□□□ 0.48
COMMD4-208ENST00000563220 WASH3PC4AMC7 463 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 PHGDHO43175 533 aaKnown RBP18.05■□□□□ 0.48
COMMD4-208ENST00000563220 GLRA3O75311 464 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 ATP5BP06576 529 aaKnown RBP18.05■□□□□ 0.48
COMMD4-208ENST00000563220 NNMTP40261 264 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 POLD2P49005 469 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 VASPP50552 380 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-208ENST00000563220 INSCQ1MX18 579 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 RGS9BPQ6ZS82 235 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 CLEC14AQ86T13 490 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 PAF1Q8N7H5 531 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 GPATCH11Q8N954 259 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 FGF14Q92915 247 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 E2F7Q96AV8 911 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 ELMO2Q96JJ3 720 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 CABS1Q96KC9 395 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 NDNQ99608 321 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 OMDQ99983 421 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 GPR63Q9BZJ6 419 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 RASSF4Q9H2L5 321 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 TTYH1Q9H313 450 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-208ENST00000563220 POMKQ9H5K3 350 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 FGFR1OP2Q9NVK5 253 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 GTSE1Q9NYZ3 720 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 TMEM216Q9P0N5 145 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 DEC1Q9P2X7 70 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 ASLP04424 464 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 UGT2B4P06133 528 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 SRPRAP08240 638 aaKnown RBP18.05■□□□□ 0.48
COMMD4-208ENST00000563220 HMGCLP35914 325 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 MAGEA9P43362 315 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 TAS2R39P59534 338 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 IRX4P78413 519 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 RAD51Q06609 339 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 PEX6Q13608 980 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 RUNX3Q13761 415 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 ADGRE1Q14246 886 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 ZNF460Q14592 562 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 GRIN2CQ14957 1233 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 MRNIPQ6NTE8 343 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 AFTPHQ6ULP2 937 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 KYAT3Q6YP21 454 aaKnown RBP18.05■□□□□ 0.48
COMMD4-208ENST00000563220 SPNS2Q8IVW8 549 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 SFTPA1Q8IWL2 248 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 MECRQ9BV79 373 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 PHTF1Q9UMS5 762 aa18.05■□□□□ 0.48
COMMD4-208ENST00000563220 PLIN3O60664 434 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 CLDN7O95471 211 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 SLC35E2BP0CK96 405 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 PSMC3P17980 439 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 CDKN1CP49918 316 aaPredicted RBP18.04■□□□□ 0.48
COMMD4-208ENST00000563220 KDSRQ06136 332 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 ZKSCAN8Q15776 578 aaPredicted RBP18.04■□□□□ 0.48
COMMD4-208ENST00000563220 GRAMD4Q6IC98 578 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 RAPH1Q70E73 1250 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 PHTF2Q8N3S3 785 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 ZNF366Q8N895 744 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 LRRC8CQ8TDW0 803 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 ELSPBP1Q96BH3 223 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 MSLNLQ96KJ4 702 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 RIPOR3Q96MK2 946 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 ZNF641Q96N77 438 aaPredicted RBP18.04■□□□□ 0.48
COMMD4-208ENST00000563220 OLFM1Q99784 485 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 HEPHQ9BQS7 1158 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 C1QTNF1Q9BXJ1 281 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 ZFYVE1Q9HBF4 777 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 SLCO1B3Q9NPD5 702 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 CRYL1Q9Y2S2 319 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 PPIL1Q9Y3C6 166 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 XIRP2A4UGR9 3374 aa18.04■□□□□ 0.48
COMMD4-208ENST00000563220 CAPN8A6NHC0 703 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 A8MX80 341 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 H7C0S8 307 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 OGNP20774 298 aaKnown RBP18.03■□□□□ 0.48
COMMD4-208ENST00000563220 MC4RP32245 332 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 OPRD1P41143 372 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 RECQLP46063 649 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-208ENST00000563220 CLCN5P51795 746 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms