RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SUN2Q9UH99 717 aa14.3□□□□□ -0.12
COMMD4-205ENST00000562310 VPS9D1Q9Y2B5 631 aa14.3□□□□□ -0.12
COMMD4-205ENST00000562310 STARD13Q9Y3M8 1113 aa14.3□□□□□ -0.12
COMMD4-205ENST00000562310 TCF20Q9UGU0 1960 aaKnown RBP14.3□□□□□ -0.12
COMMD4-205ENST00000562310 C1orf232A0A0U1RR37 186 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 HMX2A2RU54 273 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 SRRM3A6NNA2 597 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 UPK3BL1B0FP48 263 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 UPK3BL2E5RIL1 263 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 GOLGA8TH3BQL2 631 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 COPEO14579 308 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 AURKAO14965 403 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 CD3EAPO15446 510 aaKnown RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 TYROBPO43914 113 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 SHOX2O60902 331 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 LEFTY1O75610 366 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 RFPL1O75677 317 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 SLC4A1P02730 911 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 ALPIP09923 528 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 PYGBP11216 843 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 HNRNPLP14866 589 aaKnown RBP eCLIP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 CHN1P15882 459 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 HNF1BP35680 557 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 MAGEA12P43365 314 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 LEPRP48357 1165 aaKnown RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 SUOXP51687 545 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 PTPN5P54829 565 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 MESP2Q0VG99 397 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 SKIV2LQ15477 1246 aaKnown RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 SMAD1Q15797 465 aaKnown RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 AAK1Q2M2I8 961 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 TYSND1Q2T9J0 566 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 FASTKD1Q53R41 847 aaKnown RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 ZNF805Q5CZA5 627 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 RNF187Q5TA31 235 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 ZDHHC20Q5W0Z9 365 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 FSTL4Q6MZW2 842 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 PTAR1Q7Z6K3 402 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 ZSWIM9Q86XI8 627 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 DENND6AQ8IWF6 608 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 TMIEQ8NEW7 156 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 MYLIPQ8WY64 445 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 CHFRQ96EP1 664 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 MSANTD3Q96H12 275 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 PPP1R16AQ96I34 528 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 SERAC1Q96JX3 654 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 TCF12Q99081 682 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 IQCGQ9H095 443 aaKnown RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 C8orf33Q9H7E9 229 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 INTS10Q9NVR2 710 aaKnown RBP14.29□□□□□ -0.12
COMMD4-205ENST00000562310 IL17CQ9P0M4 197 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 COL6A3P12111 3177 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 CKAP5Q14008 2032 aa14.29□□□□□ -0.12
COMMD4-205ENST00000562310 FOXO6A8MYZ6 492 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 TPP1O14773 563 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 BUD23O43709 281 aaKnown RBP14.28□□□□□ -0.12
COMMD4-205ENST00000562310 ALDOAP04075 364 aaKnown RBP14.28□□□□□ -0.12
COMMD4-205ENST00000562310 MPOP05164 745 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 FOSL2P15408 326 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 CREB1P16220 341 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 ZNF30P17039 623 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 XPAP23025 273 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-205ENST00000562310 SP100P23497 879 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-205ENST00000562310 VIPR1P32241 457 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 GNGT1P63211 74 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 TMPRSS15P98073 1019 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 MPP1Q00013 466 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 CTBP1Q13363 440 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 SEPT7Q16181 437 aaKnown RBP14.28□□□□□ -0.12
COMMD4-205ENST00000562310 ARSIQ5FYB1 569 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 SH2D5Q6ZV89 423 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 LCA5Q86VQ0 697 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 RALGPS2Q86X27 583 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-205ENST00000562310 CBARPQ8N350 705 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-205ENST00000562310 DCLK2Q8N568 766 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 ANKRD42Q8N9B4 389 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 HLA-CQ95604 372 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 TSPAN17Q96FV3 270 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 SNX15Q9NRS6 342 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 FKBPLQ9UIM3 349 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 APPL1Q9UKG1 709 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 FAM50BQ9Y247 325 aa14.28□□□□□ -0.12
COMMD4-205ENST00000562310 A0A0C4DFX4 3053 aa14.27□□□□□ -0.12
COMMD4-205ENST00000562310 FAM95CA0A1B0GW59 222 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 NPIPB15A6NHN6 443 aaPredicted RBP14.27□□□□□ -0.13
COMMD4-205ENST00000562310 C1QTNF3-AMACRE9PGA6 284 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 SPECC1L-ADORA2AF8WAN1 911 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 GOLGA8RI6L899 631 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 CCL22O00626 93 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 GLRA3O75311 464 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 SPAG7O75391 227 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 AHSGP02765 367 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 CTSLP07711 333 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 ITGB7P26010 798 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 PMLP29590 882 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 TYK2P29597 1187 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 MC4RP32245 332 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 FOXN2P32314 431 aa14.27□□□□□ -0.13
COMMD4-205ENST00000562310 CTHP32929 405 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms