RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 LAMA1P25391 3075 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 NDST3O95803 873 aa22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 ATXN1LP0C7T5 689 aaKnown RBP22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 TPH1P17752 444 aa22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 PTGER3P43115 390 aa22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 RPL6Q02878 288 aaKnown RBP22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 LRRC73Q5JTD7 316 aa22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 GDPD4Q6W3E5 623 aa22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 ARMCX6Q7L4S7 300 aa22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 OR2W6PQ8NHA6 318 aa22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 CFAP36Q96G28 342 aa22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 CCDC77Q9BR77 488 aa22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 CPEB1Q9BZB8 566 aaKnown RBP22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 C6orf106Q9H6K1 298 aaPredicted RBP22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 PCDHGC4Q9Y5F7 938 aa22.52■■□□□ 1.2
SYNGR3-202ENST00000562045 GON4LQ3T8J9 2241 aa22.52■■□□□ 1.19
SYNGR3-202ENST00000562045 MAP3K13O43283 966 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 GPS2Q13227 327 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 PCID2Q5JVF3 399 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 SIRPB2Q5JXA9 342 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 PMS2CLQ68D20 193 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 SLC41A1Q8IVJ1 513 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 ZC3H10Q96K80 434 aaKnown RBP22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 ADGRE3Q9BY15 652 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 SHBGP04278 402 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 POLBP06746 335 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 ITGB7P26010 798 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 ADPRHP54922 357 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 RAD51Q06609 339 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 BCL2L1Q07817 233 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 TRAF2Q12933 501 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 STAT4Q14765 748 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 ZNF805Q5CZA5 627 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 STEAP4Q687X5 459 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 UNC5AQ6ZN44 842 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 GSDMBQ8TAX9 411 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 PTCD2Q8WV60 388 aaKnown RBP22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 LRIG1Q96JA1 1093 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 TUBGCP5Q96RT8 1024 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 BTBD1Q9H0C5 482 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 ATP13A3Q9H7F0 1226 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 FZD4Q9ULV1 537 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 SMG5Q9UPR3 1016 aaKnown RBP22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 CHKBQ9Y259 395 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 NCKAP1Q9Y2A7 1128 aa22.51■■□□□ 1.19
SYNGR3-202ENST00000562045 FAM47DPA6NHR8 397 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 C16orf96A6NNT2 1141 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 AGPSO00116 658 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 SPINT1O43278 529 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 SOCS5O75159 536 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 OXTRP30559 389 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 STX2P32856 288 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 ABL2P42684 1182 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 ZNF844Q08AG5 666 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 GRM3Q14832 879 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 POU6F1Q14863 301 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 CEP85LQ5SZL2 805 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 ERN2Q76MJ5 926 aaKnown RBP22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 CROCCP2Q86T23 111 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 PPHLN1Q8NEY8 458 aaKnown RBP22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 OR14C36Q8NHC7 312 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 PKNOX2Q96KN3 472 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 HDAC8Q9BY41 377 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 SUV39H2Q9H5I1 410 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 GGT7Q9UJ14 662 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 SOX13Q9UN79 622 aa22.5■■□□□ 1.19
SYNGR3-202ENST00000562045 FAM237BA0A1B0GVD1 139 aa22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 TRAFD1O14545 582 aaPredicted RBP22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 SEMA4FO95754 770 aa22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 IVLP07476 585 aa22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 SERPINA4P29622 427 aa22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 GALNT3Q14435 633 aa22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 MTERF4Q7Z6M4 381 aaKnown RBP22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 TMEM135Q86UB9 458 aa22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 PDCD6IPQ8WUM4 868 aaKnown RBP22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 RMDN1Q96DB5 314 aa22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 KIFC1Q9BW19 673 aa22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 OSBPL1AQ9BXW6 950 aa22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 ITM2BQ9Y287 266 aa22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 RPS6KL1Q9Y6S9 549 aa22.49■■□□□ 1.19
SYNGR3-202ENST00000562045 TCRBV9S1A1TA0A576 114 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 PRR23AA6NEV1 266 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 PLRG1O43660 514 aaKnown RBP22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 OPA1O60313 960 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 NDUFS2O75306 463 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 USP1O94782 785 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 PRLP01236 227 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 PRKCGP05129 697 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 ADRB3P13945 408 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 ADRA1DP25100 572 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 CRYMQ14894 314 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 SPANXN3Q5MJ09 141 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 SLC36A4Q6YBV0 504 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 GOLGA6L1Q8N7Z2 621 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 FBF1Q8TES7 1133 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 RANBP9Q96S59 729 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 TMEM109Q9BVC6 243 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 ROPN1BQ9BZX4 212 aaPredicted RBP22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 ACSS3Q9H6R3 686 aa22.48■■□□□ 1.19
SYNGR3-202ENST00000562045 ROPN1Q9HAT0 212 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms