RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 H0Y626 953 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 GOLGA8TH3BQL2 631 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 K7ERQ8 282 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 CBX4O00257 560 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 TPP1O14773 563 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SLC7A4O43246 635 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SMAD6O43541 496 aaKnown RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SNX3O60493 162 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 XYLBO75191 536 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 VAPBO95292 243 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 WISP3O95389 354 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 IL1BP01584 269 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 PDHA1P08559 390 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SERPINF2P08697 491 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SPRP35270 261 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 ABCG1P45844 678 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SCTRP47872 440 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 CCT5P48643 541 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 CSNK1DP48730 415 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF140P52738 457 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 MPP1Q00013 466 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 IL9RQ01113 521 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 ITKQ08881 620 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 ZKSCAN8Q15776 578 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SMAD1Q15797 465 aaKnown RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 INSCQ1MX18 579 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 PPM1JQ5JR12 505 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 RALGPS1Q5JS13 557 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 GRASPQ7Z6J2 395 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 GALNT7Q86SF2 657 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF354CQ86Y25 554 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 TMEM25Q86YD3 366 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 MFN1Q8IWA4 741 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 DENND6AQ8IWF6 608 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 NDUFAF2Q8N183 169 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 TTC30BQ8N4P2 665 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 KIAA1958Q8N8K9 716 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 GPR150Q8NGU9 434 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 OR6Y1Q8NGX8 325 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 ITFG1Q8TB96 612 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 BRSK1Q8TDC3 778 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF75CPQ92670 426 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 GTPBP3Q969Y2 492 aaKnown RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 VPS39Q96JC1 886 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SEC16BQ96JE7 1060 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 EXOC2Q96KP1 924 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 GUCD1Q96NT3 240 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 FAM111AQ96PZ2 611 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SMIM14Q96QK8 99 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 CDX2Q99626 313 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 CINPQ9BW66 212 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 C1QTNF1Q9BXJ1 281 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 LMAN2LQ9H0V9 348 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 MUC3BQ9H195 1237 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 LINC00597Q9H2U6 94 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 MFSD1Q9H3U5 465 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 RHOJQ9H4E5 214 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 IGFLR1Q9H665 355 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SNX15Q9NRS6 342 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 ABCB8Q9NUT2 735 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 TDP1Q9NUW8 608 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 FGFR1OP2Q9NVK5 253 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 MARK1Q9P0L2 795 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SIRPGQ9P1W8 387 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-210ENST00000561817 ZMYM5Q9UJ78 669 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 FBXO10Q9UK96 956 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 SH3BP1Q9Y3L3 701 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 RAI2Q9Y5P3 530 aa6.56□□□□□ -1.36
CAPN3-210ENST00000561817 TCF20Q9UGU0 1960 aaKnown RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 TMEM265A0A087WTH1 108 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 CCDC163A0A0D9SF12 145 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 LOC100996750A0A140TA64 210 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 A6NJY4 79 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 TRAFD1O14545 582 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 COPEO14579 308 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 KLF11O14901 512 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 AURKAO14965 403 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 HTRA2O43464 458 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PLIN3O60664 434 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 EDF1O60869 148 aaKnown RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 NEBLO76041 1014 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 IGHA1P01876 353 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PROCP04070 461 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 HLA-FP30511 346 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 SLC1A2P43004 574 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 LEPRP48357 1165 aaKnown RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 POLD2P49005 469 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 SERPINB8P50452 374 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 SCNN1BP51168 640 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 TIAL1Q01085 375 aaKnown RBP eCLIP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 FOXK2Q01167 660 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 SLC20A2Q08357 652 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 CTBP1Q13363 440 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 SLC12A1Q13621 1099 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 CDH18Q13634 790 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 SEPT6Q14141 434 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 GALNT3Q14435 633 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PTPRCAPQ14761 206 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms