RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 MYO16Q9Y6X6 1858 aa3.94□□□□□ -1.78
HERC1-211ENST00000560983 ANKHD1Q8IWZ3 2542 aaKnown RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 DRGXA6NNA5 263 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 K7EM74 188 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 MASP2O00187 686 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 HIP1O00291 1037 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 PIRO00625 290 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 HNRNPRO43390 633 aaKnown RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 CACNG3O60359 315 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 SDC3O75056 442 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 VPS4BO75351 444 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 ESRRBO95718 433 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 OAS1P00973 400 aaKnown RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 LDLRP01130 860 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 CENPBP07199 599 aaPredicted RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 ELANEP08246 267 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 ODC1P11926 461 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 XRCC6P12956 609 aaKnown RBP eCLIP3.93□□□□□ -1.78
HERC1-211ENST00000560983 CYP3A5P20815 502 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 CD38P28907 300 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 MCM5P33992 734 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 ARRB1P49407 418 aaPredicted RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 PDX1P52945 283 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 BCAT1P54687 386 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 TP53BP2Q13625 1128 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 KCNJ12Q14500 433 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 STARD3Q14849 445 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 EIF2S3LQ2VIR3 472 aaKnown RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 ANO4Q32M45 955 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 WSCD1Q658N2 575 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 MOXD1Q6UVY6 613 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 TIPARPQ7Z3E1 657 aaKnown RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 ZNF572Q7Z3I7 529 aaPredicted RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 CACUL1Q86Y37 369 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 BBS7Q8IWZ6 715 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 FSIP1Q8NA03 581 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 SIMC1Q8NDZ2 872 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 ZFP28Q8NHY6 868 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 WDR36Q8NI36 951 aaKnown RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 SCFD1Q8WVM8 642 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 TFAP2CQ92754 450 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 HPS3Q969F9 1004 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 OTUB2Q96DC9 234 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 ZBTB45Q96K62 511 aaPredicted RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 DRC1Q96MC2 740 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 PKMYT1Q99640 499 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 BTBD1Q9H0C5 482 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 ABCG4Q9H172 646 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 RPF1Q9H9Y2 349 aaKnown RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 DIAPH3Q9NSV4 1193 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 DNAJC17Q9NVM6 304 aaKnown RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 RBM28Q9NW13 759 aaKnown RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 FAM30AQ9NZY2 134 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 SEL1LQ9UBV2 794 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 DDX25Q9UHL0 483 aaKnown RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 SCOCQ9UIL1 159 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 ERRFI1Q9UJM3 462 aaPredicted RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 ITGB1BP2Q9UKP3 347 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 VPS4AQ9UN37 437 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 MED13Q9UHV7 2174 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 UBE4BO95155 1302 aa3.93□□□□□ -1.78
HERC1-211ENST00000560983 MYH9P35579 1960 aaKnown RBP3.93□□□□□ -1.78
HERC1-211ENST00000560983 VPS13CQ709C8 3753 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 TTC26A0AVF1 554 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 ARHGAP10A1A4S6 786 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 CXorf49A8MYA2 514 aaPredicted RBP3.92□□□□□ -1.78
HERC1-211ENST00000560983 K7ERI5 159 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 CYB561D2O14569 222 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 USO1O60763 962 aaKnown RBP3.92□□□□□ -1.78
HERC1-211ENST00000560983 LPLP06858 475 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 ADRB2P07550 413 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 MCF2P10911 925 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 LIPCP11150 499 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 ACADMP11310 421 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 TYRP14679 529 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 DGKAP23743 735 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 PRKCHP24723 683 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 NAMPTP43490 491 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 PDE6CP51160 858 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 EFNA5P52803 228 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 LGALS4P56470 323 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 KRTAP10-11P60412 298 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 IL2P60568 153 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 RPS14P62263 151 aaKnown RBP3.92□□□□□ -1.78
HERC1-211ENST00000560983 KLRB1Q12918 225 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 CT83Q5H943 113 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 MANEAQ5SRI9 462 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 SPATA1Q5VX52 437 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 C9orf57Q5W0N0 161 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 KIAA0895LQ68EN5 471 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 PPP4R3AQ6IN85 833 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 APOA5Q6Q788 366 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 HEATR4Q86WZ0 1026 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 MCEMP1Q8IX19 187 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 RHOT2Q8IXI1 618 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 DCP1BQ8IZD4 617 aaKnown RBP3.92□□□□□ -1.78
HERC1-211ENST00000560983 THEM5Q8N1Q8 247 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 MCPH1Q8NEM0 835 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 OR4C6Q8NH72 309 aa3.92□□□□□ -1.78
HERC1-211ENST00000560983 C9orf43Q8TAL5 461 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms