RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 MTF2Q9Y483 593 aaPredicted RBP8.59□□□□□ -1.03
CCDC33-209ENST00000560565 PLXNA4Q9HCM2 1894 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 MTCL1Q9Y4B5 1905 aaKnown RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 FAM86C2PA6NEL3 165 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 TRIM64A6NGJ6 449 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CFAP99D6REC4 459 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 G3V2L1 256 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 PSMD12O00232 456 aaPredicted RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 UBDO15205 165 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 HTRA2O43464 458 aaPredicted RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 ZBTB14O43829 449 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 FGF18O76093 207 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CSPG5O95196 566 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 AP2A1O95782 977 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CALCAP01258 141 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 SNRPB2P08579 225 aaKnown RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 RBP1P09455 135 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 XRCC1P18887 633 aaPredicted RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CCNA2P20248 432 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CDH3P22223 829 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 GNL1P36915 607 aaPredicted RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 SLC26A3P40879 764 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 GRIA4P48058 902 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 ALDH7A1P49419 539 aaKnown RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 SCNN1GP51170 649 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CDH8P55286 799 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 ATP6V0D1P61421 351 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 TFF2Q03403 129 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 UBE3AQ05086 875 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 SOX4Q06945 474 aaPredicted RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CAMK1Q14012 370 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 ZNF846Q147U1 533 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 UPP1Q16831 310 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 SOWAHAQ2M3V2 549 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 SLC9B1Q4ZJI4 515 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 TCEAL5Q5H9L2 206 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 MTX3Q5HYI7 312 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 NOMO2Q5JPE7 1267 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 TRMT10BQ6PF06 316 aaKnown RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 DCLRE1AQ6PJP8 1040 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 NPNTQ6UXI9 565 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 KIAA0408Q6ZU52 694 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 SLC26A9Q7LBE3 791 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 MAVSQ7Z434 540 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 TMEM135Q86UB9 458 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 TAB3Q8N5C8 712 aaPredicted RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 EMC1Q8N766 993 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CALML6Q8TD86 181 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 POF1BQ8WVV4 589 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CENPIQ92674 756 aaPredicted RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CASP10Q92851 521 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CENPNQ96H22 339 aaPredicted RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 HSFY1Q96LI6 401 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 ZNF558Q96NG5 402 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 PHOX2BQ99453 314 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 MRPL57Q9BQC6 102 aaKnown RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 SNRNP25Q9BV90 132 aaKnown RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CXCL16Q9H2A7 254 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 MRPL46Q9H2W6 279 aaKnown RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 OCEL1Q9H607 264 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 TASP1Q9H6P5 420 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CXorf21Q9HAI6 301 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 HCSTQ9UBK5 93 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 VANGL2Q9ULK5 521 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 G3BP2Q9UN86 482 aaKnown RBP8.58□□□□□ -1.04
CCDC33-209ENST00000560565 AP4E1Q9UPM8 1137 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 AP3M1Q9Y2T2 418 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 ACOT9Q9Y305 439 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 ZNF711Q9Y462 761 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 SNX13Q9Y5W8 968 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 ATG2AQ2TAZ0 1938 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 CHD6Q8TD26 2715 aa8.58□□□□□ -1.04
CCDC33-209ENST00000560565 TRIOO75962 3097 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 hCG_2014768A0A024R1R8 64 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 GRXCR2A6NFK2 248 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 TRIM64BA6NI03 449 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 MEIS3P2A8K0S8 358 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 M0QZQ0 153 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 GABRDO14764 452 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 PPEF2O14830 753 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 AKAP10O43572 662 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 CNOT3O75175 753 aaKnown RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 DEAF1O75398 565 aaPredicted RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 BCL10O95999 233 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 NPPAP01160 153 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 CYP11A1P05108 521 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 ODC1P11926 461 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 PCSK2P16519 638 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 JUNBP17275 347 aaPredicted RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 TYMPP19971 482 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 ATP5F1P24539 256 aaPredicted RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 MAP4P27816 1152 aaKnown RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 PCSK1P29120 753 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 PPM1AP35813 382 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 RAP1GAPP47736 663 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 HCAR3P49019 387 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 BCAP31P51572 246 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 OXCT1P55809 520 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 SESN2P58004 480 aaPredicted RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 RELAQ04206 551 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms